Drepanopeziza brunnea: MBM_03019
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Entry
MBM_03019 CDS
T03105
Name
(RefSeq) tetratricopeptide
KO
K12600
superkiller protein 3
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_03019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_03019
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
MBM_03019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_16
TPR_CcmH_CycH
TPR_1
TPR_2
TPR_8
TPR_14
TPR_17
TPR_12
TPR_11
ARM_TT21_5th
ARM_TT21_N
TPR_9
T7SS_EccA1_N
Fis1_TPR_C
ANAPC3
E_motif
Motif
Other DBs
NCBI-GeneID:
18758954
NCBI-ProteinID:
XP_007290908
UniProt:
K1X187
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MSKSKGAKESLKAIVASVKAQKYDDAVQEAQNLLASDPKNYQASIFLGFCYSKQNKLAEA
ETAYDAATKIKDSDPQAWQGLIQLYEKGSNQKLPAYFTAALRLAQIYEAADDKYKCQSVV
DAFLLFAKSQGTRLQYKKAQEIVLPTSPIYSYLEGRIPHPAHTYQIIAQITEFEEKERIN
TQIGERRTRLGAKIGQVTAEVKREVLKDSDLEDIYEQIIDWSNEDEIRRQYEEKLIQRCV
EALTVLPPGQDKIEKRNKAIKLATDMVIIKHPYKLAWDIAIEWKDAENIRDLDVTVLREY
YAFFPTAGLAQVLRGFLSSEISPFPPPPPLAHKFEMAGSDESEDDDDDSGGVSLDGPMPA
EDRLLLMSDGMADAGKSILAHRLMGEYYQFLEEYETVADLMRNGRRLVEEESSKTALKFE
HSSDAMTALLGTALVYYQSPKNHLEAKTLFDGLLERKPTSTPALIGVGLIYEEKEDYPAA
IDFLGRALQRDPKNIRVKTEAAWVKALNGDFDRGRDELEDCLAQINSKDLRNKDLVAQTQ
YRIGICIWNIDTSKAARKDRNGAYAYFLAALKSNLNYAPAYTSLGIFYADYLNDKKRSRK
CFQKAFELSASEVEAAERLARIFAEQGEWELVEVVAQRVVDSGKVRPSPGSKKKGISWPF
AALGVAELNKQDYARSIVSFQSALRITPNDYHSWVGLGESYHNSGRYIAATKAFQHAENF
EHEVTQQNSGQTWFAKHMLANVKRELGDYDDAIEGYKAVLTDRPAEFGVSIALIQALVES
AWDGIDKGLFGYAAGRAAETIDAALALASSRSDAFNLWRAVGDACSVFSWNQSRMSDFPH
AKMKELLKTGHAKDAYGIFADVDGVGIDVVFADGLYAKDEVEGLNLTRCLHASVLAHKRA
VHASAQDIHAQAVAYYNLGWAEHRTHVCLCAGIKKRSTRYLKAAVLCFKRAIELEAGNSE
FWNALGVVTSELNPRVAQHSFIRSLFLNERSSQAWTNLGTLYLLQNDYELANEAFTRAQS
TDPDFAHAWIGQGLLALLLSGDIQEANLLFTHAMEISESSSLITKKQYSQSTFDQLFLSK
SSSSITDFVQPLFALKQLQSMDPNDVMYQHLSTLFLERIGDLDLALEALSKICATVEADY
EVTESVASLSRFALAKADLARSQLAAGLYEEAIENGDTALQLSDEDAGNELTAESRQRCR
LSAHLTVGLAQYYSEDPEAALQYFLPALEESNGNPDAVCLLAQVLWAKGDDDSRESARDH
LYTCVDTHPEHVQCVLLLALIALLDNNALQDVTVRLQDLRTTHTTTDLEQSQVSELLSAT
AALSQKDTEKEVLTEIQTDILLHPGQPYGWNRLAEVEGDEHTADVALMTATKGVPPKGAL
NAEDLAYTFAGTGKVGDAQRAIVVAPWSAEGWDKLGAAAAGRG
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcgaagggagctaaggaatcgctgaaagctatagtagcttcagtcaaggct
cagaaatacgatgacgctgtacaagaagctcagaacctgctggcatcggatcccaagaac
taccaggcgtcgatattcctgggattctgctacagcaaacagaacaagctcgcagaagcc
gaaacggcatacgatgctgcaacgaagatcaaagactccgatccacaagcctggcaaggg
ctcatccaactgtatgagaaaggaagcaaccagaaacttcctgcatactttaccgcagcc
ttgagattagcccaaatttacgaagctgcagacgataagtataagtgtcagtctgtggtg
gatgcgttcctcttgttcgccaaaagccaaggcacgcggcttcaatacaagaaagcccag
gagatagttcttcctacaagtccaatctacagctacctggagggcagaatcccacatccc
gcccatacgtaccagatcatagcacagatcaccgaatttgaagagaaggagcggatcaac
acgcagattggtgagcgaagaaccagactcggtgctaaaattggccaggtcactgctgaa
gtcaagcgggaggtgttgaaggacagtgatttggaggatatctacgagcagattattgac
tggagcaatgaggatgagatccggcggcaatatgaggagaagcttatacagagatgtgtc
gaggcactaactgtgcttcctcctggccaagacaaaattgagaagcgcaacaaggctata
aagctggccactgacatggtcattataaagcacccttataagctggcatgggacattgca
attgaatggaaagatgccgagaacatccgagatctggatgtcactgtgctacgagaatat
tacgccttttttcccactgccggtcttgcccaggttttacgaggattcttaagcagcgag
atatcaccctttccaccgccaccccctcttgcacataaatttgaaatggctgggtctgac
gagagtgaagatgatgacgacgacagtggaggggtatctctggatggtcctatgccagcc
gaggatcgtctacttctgatgtctgacgggatggcagacgcaggaaagtcgattcttgca
cacagactgatgggtgagtactatcagttcctcgaagaatacgagactgtcgcagatctc
atgcgaaatggccgaaggctagtagaggaagagtccagcaaaactgccttgaagttcgaa
cactcttctgatgcaatgactgccctcctgggtactgctcttgtttactaccaatccccc
aaaaaccacctagaagctaagacattgttcgatggtctcctggagcggaagcctacgtcg
acgccagctttgattggtgtgggcttgatctacgaagagaaggaagactaccctgcggcc
atcgacttcctaggccgtgcacttcagcgtgacccgaagaacattcgcgtcaagactgaa
gcagcctgggtcaaggctctaaatggtgacttcgatagaggcagagacgagcttgaagac
tgcttagctcagatcaacagtaaggaccttcgaaataaagacttggttgctcagactcaa
tatcgtattggaatttgtatctggaatatcgatacctcaaaggccgcgcggaaggacagg
aacggtgcttatgcctatttcttggctgctctgaaaagcaatctgaactatgcacctgct
tataccagtcttggtatcttctacgccgattacctgaatgacaagaaaagatcccgaaag
tgtttccagaaggcatttgaactttcagcctcagaagtagaggctgctgagcgacttgcc
agaatcttcgctgagcaaggggagtgggagcttgttgaggttgtggctcagagagtagta
gactctgggaaggtacggccatcacctggttcaaagaagaagggtatcagctggcctttt
gcagctttgggagtggcggagctaaacaagcaagactatgccaggagtatcgtctctttc
cagtccgccctccgaatcacacctaatgactatcattcctgggttggtcttggcgagagc
tatcacaactctggtcgatacattgcagccaccaaggcattccagcacgcagaaaatttt
gaacacgaggttacgcagcaaaactcaggtcaaacatggttcgcgaagcacatgcttgcg
aatgtcaagcgagaattgggggactacgatgatgctatcgaaggatacaaagccgtactc
acagaccgacctgccgagtttggagtttccattgccctgatccaggccctcgtagagagc
gcatgggatggaatcgataaaggtttgttcggatacgctgccggacgagcagccgagacg
attgatgccgctcttgcacttgcatcgagcagatccgatgcttttaatctttggagggca
gtaggagatgcttgttcagtcttctcctggaatcagagtcgcatgtcagactttccacat
gcgaaaatgaaagaactcttgaaaactggccatgcgaaagatgcctatggtatctttgca
gatgtcgatggggttgggatcgatgtggtatttgcagacggactctacgccaaggatgag
gttgaagggctgaacttgacacggtgcctacacgcttcggtgcttgctcacaagcgagca
gtacatgcctcggcccaagatattcatgcccaggctgttgcatactacaatctaggttgg
gcagagcatcgaacccatgtttgtttatgtgctggtatcaagaagcgatccacgcggtat
ctcaaggctgctgtgctgtgcttcaaaagagccatcgagctcgaagccggtaattctgaa
ttctggaatgctctcggtgttgtcaccagcgagctgaatcccagagtcgcccagcattct
ttcatccggagcctgttcttgaatgaaagaagctcacaggcctggacgaatctcggtact
ctgtatctgctacagaacgactatgagttggcaaatgaagctttcacgcgagctcagtcc
accgatccggactttgcacatgcctggattggacaaggcctgctagcattgctgctcagt
ggcgatattcaggaagcgaatcttcttttcacgcatgccatggaaatttccgagtcgtct
tcactgatcactaagaagcagtactcgcaatctacgtttgatcaattatttttatcaaaa
tcctcttccagcattacagattttgttcagccattattcgcgctcaagcagctgcagtcc
atggacccgaacgacgttatgtatcaacatctttcgaccctcttcctagaacgcatagga
gacctcgatctggctctggaagcactctccaaaatctgcgcaaccgtcgaagccgactac
gaggtcacggaatcagtagcttctctatcccgtttcgccctcgccaaagcagaccttgct
cgctcccagctagccgccggtttgtacgaagaagcaatcgaaaacggcgatacggcactg
caactcagcgacgaagacgccggtaacgagctcacagccgagtcccgccaacgctgcagg
ttgtccgcacatctcactgtaggcctcgcccaatactactccgaagaccccgaagccgct
ctccagtactttcttcctgctctcgaggagtccaatggtaaccctgatgctgtatgcctc
ctcgctcaagtcctctgggccaaaggcgacgatgactcgcgcgaatcagcacgagaccac
ctctacacgtgcgtcgacacgcatcccgaacacgtccaatgcgttttacttttagcactc
atcgcgctactcgacaacaacgctctccaggatgtcacagtccgcctccaagacctgcgc
acaacgcacacaaccaccgacctcgaacaaagccaagtctctgaactcttgagcgctacc
gccgccctctcccagaaagatacagagaaggaggtattgacggagatccagacggatatc
ctcttgcaccccggacagccttatggatggaatcggctggctgaggttgagggtgacgag
cacacggctgatgttgcgctaatgacagctactaagggtgtacctcccaagggtgcgtta
aatgcagaggatttggcctacacgtttgccgggacggggaaggtcggagatgcgcagagg
gcgattgtggttgcgccgtggagtgctgaggggtgggataagctgggtgcggcggcggct
ggaaggggttga
DBGET
integrated database retrieval system
