Moschus berezovskii (Chinese forest musk deer): 129558340
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Entry
129558340 CDS
T09065
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein isoform X1
KO
K12600
superkiller protein 3
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129558340 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129558340 (SKIC3)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129558340 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_17
TPR_16
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_9
Sel1
ARM_TT21_C
ARM_TT21_2nd
Fis1_TPR_C
TPR_15
TPR_20
ARM_TT21_5th
TPR_30
TPR_6
Retrotran_gag_2
BTAD
TPR_5
HAT_Syf1_M
Vps39_1
Motif
Other DBs
NCBI-GeneID:
129558340
NCBI-ProteinID:
XP_055285399
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MLLDLPTGFSGVRMSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIG
VAAAELEQPDQAQGAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLY
ESADKQKWCDVCKKLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELHQLWRKLTQLL
AECTEDQNNETQQLVLSHVLPTLLTAFENALGLSDKIPSEDHQELYKHFIQCLSKFPHET
ARLKKACEGMINIYPTIQYPLEVLCLHLIESGSLTDEGEQYCCRLVEMDPQSGAGLIGLG
IKALQDKKYEDAVRSLTAGIKESPLCTAGWYHLAEAQVRMHKPKEAVLSCNQALKNIDNL
GVSGGSLHQKNLFLRLKAEALIKLSDYESSEEAICTLDQVSDANNIPGLLVLKGLAYLNK
GSLDEASKIMEDLLSSYPDLTEAHALEALIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQ
LGLTYWSMGEETRKDKTKALTHFLKAAKLDTYMGKVFCYLGHYYKDVVGDKNRARGCYRK
AFELDDTDAESGAAAVDLSVELEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQ
HSQAVADLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESAYSVFKVA
AIQQTLGKYKEAVAQYQLIIKKKEDYVPALKGLGECHLLLAKAALVDYLDGKAVDYIEKA
LEYFTQALQHQADVSCLWKLVGDACTSLSAVSPSKVNVNVLGVLLGQKEGKQVLKKNELL
HLGGRCYGRALKLMSTSNTWCDLGINYYRQAQHLADTGSNSDDLQELLEKSMHCLKKAVR
LDSNNHLYWNALGVVSCYTGIGNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANEKIEQ
AHEAFKMAQSLDPSYLMCWIGQALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCT
TLQDKSNRDTELYRYNILQMNAVPAAQVVLTKYVERIQNYAPAFTMLGYLNEHLQLKKEA
ANAYQRAILLLQTAEDRDAYNVTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFAL
ALFMKGLYKESSKAYERALTIVESEQDKAHILTALAIAEYKQGKMDVAKTLLFKCSILKE
PTMESLQALCALGLAMQDATLSKAALNELLKHSKQNSDYQRSLLTSAIYALQGRSVAVQR
QASKAVHSNPADPALWSLLSRVVAQYTQRNAKGGAVAGSVAHILDSNHGKKALLYTAVNQ
LAMGSNSEEDEKNTALKTIQKAALLSPGDPAVWAGLMAACHASDTLALVSSTQPKRVDLY
LALLSAVSASIKDKEFFENYSQSLERWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQP
AVILLLRQVQCKPLLESRKPLPDAVLEELQKAVLSNSTSVPAWQWLAHIYQSQGMMGAAE
MCYRKSLQVASQQGSWSGKLSSLLRLALLALEVCMANVSNDHWPSLVQEATAEALKLCFC
PLAVLLQALLQFKRKMGARETRRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELID
VLVNNATTHGDTRALELNQKLSSQ
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttgacctgcctacaggtttctcaggagtcagaatgtccagcaaggaagtaaag
actgctctgaaaagtgctagagatgccatcagaaacaaagaatataaggaagctttgaaa
cattgtaagacagtgttaaaacaagagaagaataactataatgcctgggtttttattggc
gttgctgcagctgagctagaacaacctgatcaggcccagggtgcgtacaagaaagctgct
gaattagagccagaccagctactagcttggcaggggttagcaagtttgtatgagaaatgt
aatcacataaatgctaaggatgacttacctggtgtttaccaaaagctcctggatctgtat
gaaagtgctgacaaacagaagtggtgtgatgtctgtaagaaactggtggatctgtattac
caagaaaagaaacacgtagaggtggcccgaacatggcacaaattgataaagacacgacag
gaagaaggtgcagacaaccaggagcttcatcagctgtggaggaagttgactcagttgctg
gctgagtgcactgaggatcagaataatgagacccagcaattggtactgagccatgtactc
cccacacttttaactgcttttgagaatgcactgggcttatcagacaagattcctagtgag
gatcaccaagagctttataaacatttcattcagtgtttatccaaatttcctcatgagact
gctaggttgaagaaggcctgtgaaggaatgataaacatctatcctactatacagtatcca
ttagaagtgctttgtttacatttaattgaatcaggaagtctgactgatgagggagaacag
tattgttgtagactagtggaaatggatccccagagtggcgcaggtctcattggtttaggc
attaaagcattacaagacaaaaagtatgaagatgctgttaggagcttaacagcagggata
aaggaaagccccctctgcacagctggatggtatcatctggcagaagcccaagtcagaatg
cataaacctaaggaagctgttctttcatgcaatcaagctctgaagaatatagataatctt
ggtgtgtctggtggcagtctgcatcagaagaatctttttcttcgtttgaaagcagaggct
ttgattaaactctcagattatgaatcttcagaggaagcaatttgtactcttgatcaggtt
tctgatgcaaataatatcccaggacttttggttctcaaaggcttggcctatctgaacaag
ggctcgttagatgaagcttcaaagattatggaagaccttctctcttcttaccctgaccta
actgaagcacatgccctggaggctttgattcattttaccaaaaaggactatctacaagcc
gaaaaatgttttcagcgagctcttgagaaagatgctgaagttgctgaatatcattaccaa
cttgggttaacatattggtccatgggtgaagaaactagaaaagataaaacgaaggctctt
acccacttcttaaaggctgccaaactggatacatacatgggcaaagttttctgctattta
ggtcattattacaaagatgtagtaggtgataaaaatagggcccgtggatgttataggaaa
gcttttgaattagatgacactgatgctgaatctggagctgcagcagttgacttaagtgtt
gagcttgaagagatggaaactgccttagctatcctgacaacagtcactcaaaaggcaagt
gctgggacggcaaagtgggcctggcttaggcgaggcctatactatctgaaagctggtcag
cattcccaagcagtggctgatttacaggcagcgttaagggcagacccaaaggacttcaat
tgttgggagtcattaggagaggcatatttaagcagaggtggctatacaacagccttgaaa
tccttcacaaaagccagtgagctgaacccagaatccgcctacagtgtgtttaaggtggcg
gcaatacagcaaaccctcggcaaatataaagaggcagtagctcagtaccagctgatcatt
aaaaagaaagaagattatgtgcctgctctgaaaggtttgggtgaatgccacctcctgttg
gcaaaagcagctctagtcgattatcttgatgggaaagctgtagactacatagagaaagcg
ctggaatattttactcaggctctgcagcatcaagctgatgtgtcttgcctttggaagcta
gttggggacgcttgtaccagtctctctgctgtctcaccatctaaagtgaatgtcaatgtc
ttaggagtccttctagggcagaaagaaggaaaacaagtattaaagaaaaatgagctcctc
catcttggaggaagatgttacggtcgtgcattaaaactgatgtctacatctaatacgtgg
tgtgaccttggaattaattattatcgccaagcacaacatctagcagacacaggcagcaac
tcagatgaccttcaagagttgttggagaaatctatgcattgtctgaaaaaagctgtgaga
cttgacagtaataatcacttatactggaatgctcttggtgtagtttcctgttacactggt
attggaaattatgcccttgctcagcactgtttcatcaaatcaatacagtcagaacaaatt
aatgctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaaaattgagcaa
gctcatgaagctttcaaaatggctcaatcccttgatccatcttatttaatgtgctggatt
ggacaagctctaattgcagagacagttggaagttatgacaccatggatctctttaggcac
actacagaactcagtatgcacactgagggagcaataggttatgcgtattgggtctgtaca
acgttgcaagataagagcaacagagacacagagctgtaccggtataacatcctccagatg
aatgcagttccagcagcacaagtggtcttgactaaatacgtggagagaattcagaattat
gctccagctttcaccatgttgggttacttaaatgaacatctacagctgaagaaggaagca
gcaaatgcgtaccaaagggcaattttgttgttacagactgcagaagaccgagatgcttat
aatgttacagtaagaaattatggcagattgttatgttccattggtgaatatgataaagct
atccaggcttttaagtcaacaccccttgaggagttagaagacatcataggtttcgcatta
gctttgtttatgaagggtctgtataaggagagcagcaaagcgtatgagagagccttgact
attgttgaatcagagcaggacaaagctcatattttgacagctctggcaatagcggagtat
aaacaaggaaaaatggacgtagccaagacattgctattcaaatgctctatcttaaaggaa
ccaacaatggaaagccttcaagccctgtgtgctctcggattggcaatgcaggatgctacg
ctgtcaaaggctgcacttaatgagttactgaagcacagcaaacagaacagtgattatcag
aggagccttcttacttcagccatctatgccctgcaaggccgcagtgtggcagtgcagaga
caagcatccaaagctgttcatagtaacccagctgatcctgctctttggtccctgttgtcc
cgagtggttgcccagtacactcaacgaaatgcaaagggaggtgcagtggcaggaagcgtg
gctcatattctggactcaaatcatggaaagaaggcattgctgtacactgcagtaaatcag
ttggctatgggaagcaattcagaagaagatgagaaaaatactgcactaaagaccattcaa
aaggcggctctcctttctccaggtgaccctgctgtctgggctgggctgatggcagcttgt
catgccagtgatacactggccctagtgagcagcactcagccaaagagggtggatttatac
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattctttgaaaattac
agccagtctcttgaaaggtggtctctctctcaagctgtcactggtctaatagacacagga
agaatatccgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcaacca
gctgttatcttactgttgagacaagttcaatgtaaaccactcctggagtcacgaaaacct
ctcccagatgctgtacttgaagagctgcaaaaagcagtcctgtctaactcaacctctgtt
ccagcttggcagtggctggcacacatatatcagtcccaaggaatgatgggtgctgcagag
atgtgttacaggaagagcctgcaagtagcatcccaacagggcagctggagtgggaagctc
tcaagcctgttgaggctagcactgcttgcattggaagtctgcatggctaatgtttccaat
gatcactggccatccttggttcaagaagctacagctgaggccctgaaactttgcttttgt
ccactggctgtccttttacaagctttgttacaattcaaacgcaaaatgggagcaagagag
acacgacgacttttggagagagttgtgtatcagcctgggtatcccaaatctattgtttca
acagcacgttggtatcttctgagacacttacatgccaaaaatgactacgagctcattgat
gtgctggtaaacaatgccacaactcacggagatacaagagcattggaactgaatcagaaa
ttgtcctcacaataa
DBGET
integrated database retrieval system
