Monosiga brevicollis: MONBRDRAFT_33815 Help Entry MONBRDRAFT_33815  CDS       T01042                                  Name (RefSeq) hypothetical protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism mbr  Monosiga brevicollis Pathway mbr03018   RNA degradation Brite KEGG Orthology (KO) [BR:mbr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     MONBRDRAFT_33815  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mbr03019]     MONBRDRAFT_33815 Messenger RNA biogenesis [BR:mbr03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      MONBRDRAFT_33815   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      MONBRDRAFT_33815 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT ARM_Cnot1 hnRNP_Q_AcD Motif Other DBs NCBI-GeneID:  5893996 NCBI-ProteinID:  XP_001748736 JGI:  33815 UniProt:  A9V7Q3 LinkDB All DBs AA seq 1704 aa AA seqDB search MVAWYESAAESATAVNRLTRILEIAQDIKALEALLNARNFNFVMELAVLAFQREFLNLEK WLQPRLEEHPEAFATACLHFLDRRLTRGPEATSGTPSKALVIIAEQCGHLQSNRNISPQL KNALLNVAERFAQPRGNRMVALPFNVGSGPGATALRPPPLVSGAPLSDGVHGASSSAVDS FGPPVGLKSPGPVARSAPAHPDATRPTTDVADANEFTPAIEAQANHYFQQVYMEKTSVHE IIQLLGRFKASPDPEKQQVFHCMIRNLFDEYKFLPEYPDKQLQITGELFGLLVQHDLVYD HSLGNALRCIYEAVKHDPDSRLFAFGTHALANFHQRLPEWRDYCQALAHTPHFTRLPAEV RFACLNGRGGASAGPAGGKAGLMAESQPDPPENIRERVIFVINNLAPEPSRMKESAATLH GLLDRQYHMWFAGYLVEQRAMLEPNNLEMYVKLIDLIGQDDLRRATLARTYLAVHNAQRR QSSSSNISDSQERTRLKNLATFLGLQTLARNKPILQRDLDLKAIILSSYEQGSRSLQLLL PFVAKVLDTAQYSRVFRPPNPWLMSLLRILKELHSTEQLKISLKFEVEVLCRNLNIALHD IEASHLLPAKNLSPAFDAIGTPSFHGASPAIEGTAIGGGALAGGNAAGSAQTSSSGHLTV PASMFADLVPGQPRSIMNYIRPGPLSSLGLAPESLQDAIYKAIERAINEMLPPVFERSIR VASISCFNLITKDFNREPDETKMRQAGLLMIQNLAGSIAVVSAKDTLRTTAESILTTSIK NLLSGQSQDLEHIVRDVININLPVACSFIEATVRQRSVAVFEKQMAPQYLLRQTHRREGT TEPFEAAHLPYVDSMPENLRPQFGGLSSRQMGVYLRFARNQQDLLAVGRLTERPPVVAAN QNSAPAIIDGLIRDMVLLTSGQAEPDAQHIGEHVNNILQHLSTNPAEAPRLVRFATTALI DHQKARSSALQDAMLNVLVRLKDALPGCVRDICLVAVTQCDGTLDTAEKLLRLVKFRLVR IEDLDTALVQALDSGRSPHGLAILKSVLTVALNGAAGSSFLLGLLRSITLFERIVTHQKS EQRHARLLESVKAELAKEVERGSEASNNASNAHAAGSGPGSTTAALPASVPGFGQAPAPT SSAPSGGVTGNLRSGGDAPTAGPALSRASNNDRLRRAMAMFSSLDLLSLDQDPPQLLELV ASFFVDEWMSLYSSGSYEPAVPAFIRKLTENVLNSSDMTACFFRVATEVSVKLAFLMADG HFDFALQAPNYKPIDAFCALVIAVVRHFGDSTKVALLRKVLSVCIIVLGHVHDRLGVNFN QKPFHRLLSRLLAEVHTDDEHLAIQVLSSFANAFHVVRPAQCPAFALSWLDLISSRHFLP LMLSASGQSGQDLQHQYHVLVMDLLMFLQPLLRSAQLSDSVRVLYKATVTLVLVILHDFP DFLCQYYLSYCDVIAPCCLQLRNLILSAHPAAMRLPDPFSSPLSVDSVPEYARTPVISSN YTAALEDSSRPAIRTFFDYGLENQHEPTIHMIALSLKSMPHDVHFTALTSISGTDYNTPL LNALVTEIMVRACAEESLSDAAVGVLGRLLQMLDGQGRYLLAMAMANHLRFPNQHTLWMS KAYLKVYAAASAECQEQLTRVLFERLVVARPHPWGLLVTFTELIQNRSYDFWNASFIHIA PEIEKLFHTVARSCLHAVRPATQS NT seq 5115 nt NT seq  +upstreamnt  +downstreamnt atggttgcttggtacgaaagtgccgccgagtcagcaaccgcagtcaatcggctcactcgc atccttgagattgcgcaagacatcaaggctcttgaggcgcttttgaacgcccgcaatttc aattttgtcatggagctggctgtgctcgcgtttcagcgcgagttcctgaacctcgagaag tggttgcaaccgcgccttgaagagcatcccgaagccttcgccactgcctgcttacatttc cttgatcgtcgtctgacacgcggcccggaagctacttcgggtacaccgtccaaggctctc gtcatcattgcagagcagtgcggccatctgcaatccaaccgcaacatctcgccccagttg aagaacgcgctactgaacgtggctgagcgatttgctcagcctcgaggtaatcgcatggtt gctctgcctttcaatgttggctcgggcccgggtgccactgcgctacgcccgccccccctt gtatccggtgccccactctcagacggtgttcatggcgccagctcgagtgctgtggattca tttgggcctcccgttggcttgaagagcccgggccctgttgcgcgctcggcaccggcccat cctgacgctacccgaccgacgaccgatgttgcagatgcaaacgaattcaccccagccatc gaggcacaggctaaccactactttcaacaagtttacatggagaaaacaagtgttcacgag attattcaacttctgggtcgattcaaggcctcccctgacccggagaagcaacaggttttt cactgcatgattcgcaacctctttgacgagtacaagtttctgcccgagtacccggacaag cagttgcaaatcacgggcgagctgttcggcctactggtgcagcacgatttggtgtatgac cattccttgggtaacgctttgcgctgcatttacgaggccgtcaagcacgacccggactcg cgcttgtttgcctttggcacacatgccctcgccaatttccaccagcggttgcccgagtgg cgggattactgccaagcgctggcacatactccccacttcacgcgcttgcccgccgaggtg cggtttgcctgtctcaacggccgcggcggggccagcgcggggccagccgggggcaaggca ggattgatggccgaaagccagcctgatccacctgagaacattcgcgagcgcgtcatcttc gtcatcaacaatctcgcacccgagccctcgcgcatgaaggagtcagctgctacactgcac ggcctgttggaccgtcagtaccacatgtggtttgccggctatttggtcgaacagcgagcc atgctggaacccaacaacttggaaatgtacgtgaagctcatcgacctcattggtcaggat gacctgcgtcgtgctaccttggcccgcacctacctggccgtgcataacgcccagcgacgt caaagcagtagctccaacatttccgacagtcaggaacgcaccagactcaaaaatctggct acttttttgggtttgcagaccctggcgcggaacaagccaatcctgcagcgagatctggat ctcaaagcaatcattctttcctcctacgagcagggctcgcgctccttgcagcttcttcta ccctttgttgccaaggtgctggacacggctcagtactcgcgagtctttagaccacccaac ccttggttgatgagcttactgcgtatcctcaaggagctgcattccaccgagcagctcaag atcagcctcaagtttgaagtggaagtcctgtgtcgaaacctcaacattgctttgcacgac attgaagccagccatttgcttccggcgaagaacctgtcgccggcattcgatgcaatcggc acaccaagcttccatggcgcgtcgccggccatcgaaggcactgcaatcggtggtggcgct cttgctggtggcaatgctgcaggcagtgcccaaacatcaagcagtgggcatctgaccgta ccagcttccatgtttgcagatctggtgccaggtcaacctcgatccatcatgaactacata cgaccgggtcccctgagctcactgggattggcacccgaaagcttgcaagatgctatttac aaggccattgaacgagccatcaatgagatgctacccccagtttttgagcgatccattcgc gtggctagcatctcctgcttcaatctgatcaccaaggacttcaaccgcgaaccagatgag acgaagatgcgccaagcaggtttgctgatgattcaaaatctggccggaagcattgccgtc gtaagtgccaaggacacgctacgaactactgccgagtccattttgacgacgagcatcaag aacttgctctccggtcaaagtcaggatcttgagcacattgtgcgagatgtgatcaacatc aacctgcccgtggcctgcagcttcatcgaggctaccgttcgccagcgctcggtggccgtg tttgaaaagcagatggcaccgcaataccttcttcgtcaaacacaccggcgtgagggaacc accgagccgtttgaagcagcccatctcccctatgtcgatagcatgccagagaatttgcgc ccgcaatttgggggtctttcgtctcgtcaaatgggcgtatatctgcgttttgcccgcaat caacaagatttgcttgctgtgggtcgtttaactgaacgccctcccgtcgtcgctgccaac caaaactcggccccggccatcattgacggattaatccgggacatggtgctcctgacgagt ggccaggcggaacctgatgctcagcacattggcgaacacgtcaacaacattctccagcac ttatccaccaatcccgctgaagccccccgcctcgtgcgctttgccactactgcgttgatt gatcatcaaaaggcgcgcagttccgcgttgcaagatgccatgctgaatgttcttgtgcga ctgaaagacgccctccccggttgtgtgcgagacatctgcctcgtggctgtgacgcaatgt gacggaactcttgatacggcggaaaagctattgcgccttgtcaaattccggctcgtgcgc attgaggaccttgatacggctttggttcaggccctcgattcaggccgctccccgcacggg ctcgccatcctgaagagcgttctgaccgtggccctcaatggtgctgctggctcgagcttc ctgctcggcttgttgcgctccatcactttgtttgagcgcatcgttacccatcaaaagtca gagcagcgtcacgcccgcttgctcgagtctgtcaaggccgagttggccaaagaagtagag cgcggctctgaagcatcgaacaacgcgagcaatgctcacgctgcgggcagtggacctggc agcacgaccgctgcgcttcccgcctcagtgcccggttttgggcaggcgccggccccgact tccagcgcgcccagcggtggtgtcacaggcaacttgcgctctggtggtgatgctccgacg gctggcccggccctatctcgtgcctccaacaatgaccgtctacgccgggctatggccatg ttttcttccctggacctcctgtccttggatcaagatccacctcaacttctggagcttgtt gcgtcctttttcgtcgatgagtggatgtccctgtacagcagtggctcatacgagccggcc gtcccggcctttatccgcaagctcacggagaacgtcctcaacagcagtgacatgactgct tgctttttccgagtggcgactgaagtgtcggtcaaactggcatttttgatggccgatggc cactttgattttgccttgcaggcgcccaactacaaacccattgatgccttttgtgccctc gtcatcgcggtcgttcgccactttggtgattcaacaaaggtggcacttcttcgcaaggtc ttgtccgtgtgcatcattgttctgggccatgtccatgatcgtctcggcgtgaatttcaat caaaagccgtttcatcggcttctcagccggcttctagctgaagtgcatacggacgacgag catcttgcgattcaagtcttgagctcatttgccaatgcctttcatgtggttcgcccggct caatgcccggcatttgccttatcttggctagacttgatcagctcgcggcacttcctgcct ttgatgctttcagcctcgggccagagtggccaagacttgcagcatcaataccatgtgctc gtcatggacctcctcatgttcctgcagcccctcttgcgatcggcacaactttccgacagc gttcgcgtcttgtataaggctactgtcaccctggttttggttatccttcacgactttcca gactttctgtgccaatactacctcagctattgcgatgtgattgcgccttgctgtctgcaa ctacgcaaccttatcctttctgcgcaccccgcagccatgcgcctgccagaccccttctcc tcaccgctaagcgttgacagcgtgcccgagtacgctcggacgccagtcatctcctccaac tacacggccgcacttgaggactcgtcgaggcctgctattcgcactttttttgattatgga ctggaaaaccagcatgaacccaccatccacatgattgctttgtcgctcaagtccatgcct cacgatgtgcactttaccgcgctcacctcgatcagtggcacggactacaacacgccgctt ctcaacgccctggtgacagagataatggtgcgggcgtgcgctgaggagtcgctctccgat gctgccgtgggggtgctgggccgtttgcttcagatgctggacggtcaggggcgctatctg ctggccatggccatggctaaccatctgcgcttcccaaatcagcacacgctgtggatgagc aaggcttatctcaaagtttacgccgctgcttcagccgaatgtcaagagcagttgacccgt gtgctttttgagcgtctggttgttgctcgccctcacccttggggcctcttggtgactttt acggaactcatccaaaatcgctcatatgacttttggaatgccagcttcattcacattgct cctgagattgaaaagctcttccacaccgtagcccggagttgcctccatgctgtgcgcccg gccacgcaatcatag

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