Metarhizium brunneum: 26245036
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Entry
26245036 CDS
T10216
Symbol
exo2, G6M90_00g003490
Name
(RefSeq) 5'-3' exoribonuclease 1
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03008
Ribosome biogenesis in eukaryotes
mbrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
26245036 (exo2)
09123 Folding, sorting and degradation
03018 RNA degradation
26245036 (exo2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrn03019
]
26245036 (exo2)
03009 Ribosome biogenesis [BR:
mbrn03009
]
26245036 (exo2)
03016 Transfer RNA biogenesis [BR:
mbrn03016
]
26245036 (exo2)
03036 Chromosome and associated proteins [BR:
mbrn03036
]
26245036 (exo2)
Messenger RNA biogenesis [BR:
mbrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
26245036 (exo2)
mRNA degradation factors
5'-3' decay
5' exonucleases
26245036 (exo2)
Ribosome biogenesis [BR:
mbrn03009
]
Eukaryotic type
Pre-60S particles
RNases
26245036 (exo2)
Transfer RNA biogenesis [BR:
mbrn03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
26245036 (exo2)
Chromosome and associated proteins [BR:
mbrn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
26245036 (exo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
Phage_holin_T
DUF2533
Motif
Other DBs
NCBI-GeneID:
26245036
NCBI-ProteinID:
XP_014542005
UniProt:
A0A7D5UT79
LinkDB
All DBs
Position
1:complement(join(1136260..1138799,1138850..1140160,1140211..1140520,1140582..1140675,1140728..1140732))
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AA seq
1419 aa
AA seq
DB search
MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEE
MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIKEG
VEMPKEEPFDSNCITPGTEFMAKLSQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEH
KIMEYIRNAKAQPNYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKAKSK
ELEHQNFYLLHLCIVREYLEMEFQELHQEGTLSFPLDLERIIDDFILMAFFVGNDFLPNL
PGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSFENDISD
EKWFASKQMEKKLEAKNGGSNKNAKTGHLVITSFQRDLWKQKIRPFVSKRSADALDLGIT
LKAADRKFAQDIADAMHLDWSTKENENGDRHLVLSFPARRGGGKDEDEDEEEEEGNLAAF
RVIKSYDKALVVDVTSEEAQQQYEKLYNEKYAGWKTKYYLQKFPEWAPEKYEKEQIDLCQ
NYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLGFKKGQPFKPYEQLMGV
LPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDA
MAPKNDLLEDDEKSRNGFGVPIKFTYSADVNFKYPSPLPGIFPEIQSCHCIENIFDLPDM
EGLEYVSGLATGALVKVEALAGFPTLHTLPYTAQIIEGYGINVFQQDSRNPSIVVTLTDT
NLRTSIETFKAKLGQRCYVGYPFLQEAKIMKVQDELFSYELAEDGQDVVAKDHSNREASD
FSKEAEYLESWHAKRLGVIVGQVECLVHVHMLKGLLKTEEGALIKEYAENPSVRSVYASQ
TVVDEVVNEDERFIEKEALPIEEEFPLGTRAFFLGEYAYGRPLEVTGHVKGKTEVVVSIP
RNKEPEFSKRIIHQAERTNPYTPSFAVAKQLGVHPLVLSKITSSYQVSTAAGLRLNLGLN
LKFEARKLKVLGYSRKAHTGWEFSSLAIKLIADYMVAFPDFFAAIQKGAQRSEICETDLW
NDPVVASQRVKDVVAWLKKQETSKFERVPLEAEQLDSEVVTALANAGEQVYQASQDIDIK
KLKGVPRAAILKPSDAELVLGNQNFSLGDRVTFAASAGKVPIATPGTVAGISRTATALLL
DVVWDTSFMSGTTLGERAPMFRGQTVPSSSVLNTTDKQVISASSKSQQKRATSTISTGFY
GSVGVPQYKDAPAPAPLRGGWRGALNGSGHSTPGRNSPSRGSPGRGRGSPSMGPQRGGSN
GTAPNLLHSTLVYRDGSSRTPPEQTANGTTWRGGGRGRGRGSHHETPSPQPGKYSSVPPP
ASLDGNGGGRGRGRGRGRGGANRGRGGNGRGGTTPPARS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcccaagttctttagatggctctcggagcgatatcctgccatttcgcaactc
attgcagagaaccgaatacccgagtttgattgcctatatctcgatatgaatggtatcatt
cacaactgcacccacaaagatgctggagaagacgtttcttttcgcctctcagaggaggaa
atgtttataagaatcttcaactacattgagcacttgtttggcaaaataaaacccaaacag
ctcttctttatggctattgatggtgttgcaccaagagctaaaatgaaccaacaacgggcc
cgtcgcttccgtaccgctctggatgctgagaaagcccgcgagaaggccatcaaagagggc
gttgagatgcccaaggaagagccgtttgatagcaattgcatcaccccaggaactgaattc
atggcgaagctatcgcagcagctgcgatactttgtcaacaaaaaggtctcggaagatgcc
gactggcaagggtgcgagattgttctttcaggccacgaggtccctggcgaaggagaacac
aagattatggagtacattcgaaacgcaaaggcacagcccaactacaaccccaacgtgcga
cactgtttgtacggattggatgcggatttgatcatgctgggtctgctcagccatgacccc
catttctgtcttctccgagaagaagtcaccttcggacgagcatccaaggccaaatccaag
gagcttgagcatcaaaacttctatctgcttcatttgtgcattgtacgagaatacttggaa
atggagtttcaggaactacatcaagagggaacgttgagttttccacttgatctcgaaaga
attattgatgattttattttgatggctttctttgttggaaatgatttcttgccgaatctc
cccggtcttcacatcaacgagggcgcattggcaaacatgttcaaaatctacaaggcggtt
ctaccaacttgcgatggttatatcaacgagaatggtgttattaacatggctcgattggac
aagctgttgacggagctaagtaagcttgagttagtgtcatttgaaaatgacatttcagac
gaaaagtggtttgcatcgaagcaaatggagaagaaactcgaagcgaagaacggaggaagc
aacaagaacgccaagaccggacacctggtcattacttcgtttcagcgcgatctatggaaa
cagaagatccgccccttcgtctcgaaacgttccgccgacgccttggatctcggtataact
ctcaaggcggcggaccgcaagtttgcccaagatatagcggatgcaatgcacctagattgg
tctaccaaggaaaatgaaaatggcgatcgccatcttgtgctgtcatttcctgctcgacga
ggaggtggtaaagacgaagatgaggatgaagaagaggaggaaggcaacctggctgcattt
cgtgtcattaaatcatatgacaaggctttggttgtcgatgtgacgtcggaagaggcacag
cagcagtacgaaaagctctacaatgaaaaatatgccggctggaagaccaagtattacttg
caaaagttcccggaatgggccccggaaaagtatgaaaaggagcaaatcgacctgtgccaa
aactatgtccaaggcctgcagtgggtgctcttctattattataagggcatcgcttcgtgg
ccatggttttatggttaccactatgcccctctaatctccgatgttgctaagggcctcaac
gcggatctcggcttcaaaaagggacaacctttcaaaccatacgaacagctcatgggtgtg
ttgcctgatcgaagtaagaagattgtgcccaaggtgtaccacgacctaatgacgaacccc
aattcacctattatcgacttttatccccgcgacttcgaactcgacatgaatggcaagaaa
atggaatgggaagccgttgttaaaatcccctttatcgatgaaaaacgactactggacgct
atggcccccaaaaatgatctattagaggacgatgaaaagtcacgaaacggatttggtgtt
ccgatcaagttcacgtattctgcagatgtcaacttcaaatatccatctccgctgccaggg
atctttcccgagatccaaagctgccactgtattgagaacattttcgacctgcctgatatg
gaaggtttggagtatgtctcaggcttggccactggagctttggtaaaggttgaggctttg
gcaggttttccgacgctgcatacattgccttacaccgcccaaatcatcgaaggctacggt
atcaacgtcttccagcaggatagcagaaatccgagtattgttgtcaccctgactgataca
aatctgcgtacgagcattgaaactttcaaggctaaattgggccagcgatgctatgtgggc
tacccatttcttcaggaagctaagattatgaaggttcaggacgagctcttctcgtatgag
cttgctgaagatggccaggatgtagtcgccaaggaccattcaaatagagaagcttctgac
ttctcgaaggaagccgaatatttggagagttggcatgccaagcgtctgggcgtcattgtc
ggacaagtagagtgtcttgtacatgtgcacatgctcaaaggtctcctcaaaactgaagag
ggcgcgctaatcaaggaatacgccgaaaatcccagcgtgcgcagtgtttatgcctctcag
accgttgtggacgaagttgtcaacgaagacgagagatttatcgagaaggaggctcttccc
atcgaggaggagttcccgctaggtaccagagcctttttcctcggtgaatatgcttatggc
cggcccctcgaggtcactggtcatgtcaagggcaagacggaagttgttgtttccattccg
agaaataaagaacccgagttctccaagaggattattcatcaggccgagcgcaccaatcct
tacacaccatcctttgctgtggcgaaacaactgggcgtgcaccccttggtactgagcaaa
atcacctcatcctatcaagttagcactgctgcagggctgaggctaaatctgggcctcaat
ctcaagtttgaggcccgcaagctcaaggtcctgggatattcacgaaaggcgcacactggg
tgggaattcagctccttggcaataaagctgattgctgattacatggttgcgttccccgat
ttcttcgcagccatacagaagggagcacagagaagtgaaatctgcgagaccgacctgtgg
aacgaccctgttgttgcctcacagcgcgttaaggatgttgttgcttggttgaagaagcag
gaaacaagcaagttcgagcgagtgccactcgaggctgagcaactcgactccgaagttgtc
acagctttggccaatgctggcgagcaagtgtaccaagcgtcccaagacattgatatcaaa
aaactcaagggcgtcccgcgtgcggcaattttgaagccatctgatgcagagttggttctg
ggcaaccagaacttcagcttgggtgatcgtgtgaccttcgctgcttcggccggaaaggtg
cccattgctacaccagggacagtagcgggcatcagtagaactgctaccgccctgcttctt
gatgtggtgtgggatacatcatttatgagtggtacaactctgggcgaacgagctcctatg
ttccgaggccaaactgtaccatcttcatccgtgttgaatacgaccgacaagcaagtcatc
tctgcgtccagcaagtctcagcagaagcgagctacatcgacaatatccacaggattttac
ggatctgttggtgttccccagtacaaggatgctcccgctcccgctcctttacgtggtgga
tggcgaggtgctctcaacggcagtggccatagcactcccggacgaaactctcctagtaga
ggatctcccggtagaggtagaggcagccccagcatgggaccccaacgcggcggcagcaat
gggaccgcacccaacttgctccacagcacactggtgtaccgtgatggttccagtaggact
cctccggaacagactgccaacgggacgacttggcgcggtggcggtcgtggcagaggtcgt
ggcagtcaccatgagacgcctagcccacagcctggtaaatacagcagcgttccacctccc
gcgagtctggatggcaacggtggtggacggggccgtggccgaggcagaggtcgcggtggc
gcgaacagaggaagaggaggcaatggacgggggggaactactcccccggctcggagctaa
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integrated database retrieval system
