KEGG   Methanococcoides burtonii: Mbur_0141
Entry
Mbur_0141         CDS       T00341                                 
Name
(GenBank) signal recognition particle SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mbu  Methanococcoides burtonii
Pathway
mbu02024  Quorum sensing
mbu03060  Protein export
mbu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mbu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Mbur_0141
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Mbur_0141
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Mbur_0141
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mbu02044]
    Mbur_0141
Enzymes [BR:mbu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Mbur_0141
Secretion system [BR:mbu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Mbur_0141
  Eukaryotic Sec-SRP protein
   Mbur_0141
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA cobW 6PF2K nSTAND3 APS_kinase MeaB ATP_bind_1 AAA_33 AAA_16 AAA_19 Thymidylate_kin AAA_30 DUF4919 AAA_24 TrwB_AAD_bind KTI12 MobB AAA_18 TFIIA_gamma_N PRK LpxK AAA_28 SMC_N
Other DBs
NCBI-ProteinID: ABE51158
UniProt: Q12ZG8
LinkDB
Position
complement(122790..124109)
AA seq 439 aa
MVMDKLGSSLQDALKKLVGAGRIDEKTVTEVVKDIQRALLQADVNVKLVMQMSSHIKERA
LKEEVPPGMNPREHVIKIVYQELISIVGRSADIPLKPQTIMMIGLQGSGKTTTTSKLSRY
FQRKGLKPAVICADTFRPGAYQQLKTLCDKLNVPFYGEVGNPDAVGIVERGLAELGKNDV
LIVDTAGRHSLEADLIDEMEQIHEIAQPDYKLLVLDGAIGQQASEQARAFNDSVGISGVV
ISKLDGTAKGGGALSAVSETNSAIAFIGVGETPDDLEKFEPDRFISRLLGMGDIKSLIEK
AEETLSEEDIDMEAMMRGRFTLKDMYSQLEAMNKMGPMKQIMQMLPLGGMGAKLSDDAYK
VTEDKMKGYRVLMDSMTEEELLNPRLLGSSRIKRISLGSGSSPDAVRELLKYYKMMQNAM
KGLRGGKFNIQKMMKKMGM
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggtaatggataaactcggcagttctcttcaggacgctttaaagaaactggtcggcgct
gggcgcatcgatgaaaaaacggtcactgaggtcgtaaaggatattcaaagagcattgttg
caggcggatgtcaatgtcaagcttgtaatgcagatgtccagtcacatcaaggaacgtgcc
ttgaaggaagaagttccgcctggaatgaacccacgtgagcatgtcatcaagatcgtttat
caggaactcatcagtatcgtaggcagaagcgctgatattcctctgaaacctcagacgata
atgatgattggtctgcagggcagcggtaagaccactacgacttccaaactatcccgctat
ttccagagaaaaggacttaagcctgctgtcatttgtgcggacacgttccgtccaggtgca
tatcaacaattgaagaccctttgtgacaaattgaacgttccattctacggcgaggtaggt
aatcccgatgccgtggggatcgtggaaagaggattggcagaacttgggaagaacgatgtc
cttatcgtggacacggcaggtcgtcactctctggaagctgacctcatcgatgagatggaa
cagatccatgagattgcacaaccggattacaaattactggtccttgatggtgccattggt
cagcaggcaagcgagcaagcaagggctttcaatgattctgtgggtatttccggagttgtc
atctccaaactagatggtactgcaaaaggtggtggggcattgtccgctgtctccgagacg
aattccgccattgctttcattggtgtgggtgaaaccccggacgacctcgagaagttcgaa
ccggatcggttcatttcccgtcttcttggtatgggtgatatcaaatcactgatcgaaaag
gcagaagaaactctttctgaagaggatattgacatggaggccatgatgcggggccgtttc
actctcaaggacatgtattcacagcttgaggcaatgaacaagatgggtcctatgaaacag
atcatgcaaatgctccctcttggtggtatgggtgctaagctttcagatgatgcttacaag
gtcaccgaggataaaatgaaaggttatcgtgttctcatggactcaatgactgaagaggaa
ctcctcaatccaagacttctcggtagttcacgtatcaagaggatctccttgggttcgggt
agcagtccggatgctgtgcgggaacttctaaaatattataagatgatgcaaaacgccatg
aaggggcttcgtggtggtaagttcaacatacagaaaatgatgaaaaagatgggaatgtaa

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