Methylotuvimicrobium buryatense: EQU24_11765
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Entry
EQU24_11765 CDS
T05995
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03410
Base excision repair
mbur03430
Mismatch repair
mbur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQU24_11765 (recJ)
03430 Mismatch repair
EQU24_11765 (recJ)
03440 Homologous recombination
EQU24_11765 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbur03400
]
EQU24_11765 (recJ)
DNA repair and recombination proteins [BR:
mbur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EQU24_11765 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EQU24_11765 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EQU24_11765 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QCW82843
UniProt:
A0A4P9UQL2
LinkDB
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Position
complement(2628564..2630309)
Genome browser
AA seq
581 aa
AA seq
DB search
MYSQGVKKTIIPRPPGKKKLDLGDMHPVLQRIFLSRGIKSADELDRSLAGLPSPWLLSGM
KDMVAHLIEALNQQKRITIVADFDADGATSCALAIRGLRMLGAVNVDFIVPNRFEYGYGL
TPEIVELAKRQAPELIITVDNGISSIAGVDAAKALGIKVLVTDHHLPGEILPEADAIVNP
NLPDEAFPSQALAGVGVMFYVLTALRGRLREIDWFQQQAIPEPNLAQLLDLVALGTVADV
VPLDQTNRILIHQGLQRIRSGRCHPGILALVEVSGRNYRYLSSSDLGFALGPRLNAAGRM
DDMALGIQCLLTDDLPLAKDIAQQLDEMNRDRRDIEGQMKIEAMGLLNEMKALDEKHLPA
GVCLFDENWHQGVIGILASRIKDRLHRPVVAFAPAGNGEIKGSARSIPGVHIRDVLSDIA
AAHPNILNKFGGHAMAAGMSIQMHDYPPFALAFDEMVGRRIANMDLEQTVYSDGKLSENE
LTLEFAELLQRSGTWGQEFPEPVFDGVFEVIQARIVGQHHLKLVLRQAENKQLIDAIAFF
IEKPEQWLGIRTIHAAYKLDINEYRGNRALQFVIQYLEKLN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtactcccaaggcgttaaaaaaacaattattccccgtcctccgggtaagaaaaagctg
gatttgggtgatatgcacccggtgttgcagcgcatatttctaagccggggtattaaatcc
gcggatgaattagaccgttcgttggcaggattgccttcgccgtggcttttgtccgggatg
aaggacatggtcgctcatttgatcgaagcgctaaatcagcagaagcgaatcactattgtg
gccgatttcgatgccgacggggcgaccagttgcgcccttgctatcaggggcttgcgcatg
ctcggtgcggtcaatgttgacttcatcgtgccgaatcgtttcgaatacggttacgggttg
acgccggagattgtcgagttggccaaacgccaagcgcccgaattgattatcacagtcgat
aacggcatatcgagcatagccggcgttgacgcggctaaggcactagggattaaggttttg
gttaccgatcaccatttgcccggcgagatattgcctgaggccgatgcaatcgtcaatcct
aatttaccggacgaagcttttcctagccaagcattagccggtgtcggcgtaatgttttat
gtactgaccgcactgagaggccgtcttcgtgaaatcgattggtttcaacaacaagccatc
cccgaaccgaatctagcgcaactactggatttggttgccttgggcacggtcgccgatgtc
gtgccgctcgatcagaccaatcgaatcttgattcatcaaggcttgcagcgaattcgttcg
ggccgttgtcatccgggaatactggccttggtcgaggtatcgggtcgtaattatcggtat
ttatcctcatccgacctaggctttgcactggggccaaggctcaacgctgccgggcgcatg
gacgatatggcgctgggcatccagtgtttgctgacggatgatcttcctttggccaaggat
atcgcacagcagcttgacgagatgaacagggatcgccgggatatcgaaggtcagatgaag
atcgaagcgatgggactgttgaacgaaatgaaagccttagatgaaaaacatctgccggcc
ggcgtttgcttgttcgatgaaaattggcatcaaggtgtgatcggtattctggcatcaaga
atcaaggatagactgcatcgcccggtcgtagcttttgcgccggccggtaacggcgaaatc
aaaggttcggcgcgttcgattcccggcgtgcatattcgtgacgttctgagcgacatagct
gcagctcatcccaatattctcaataaattcggcggccatgcgatggctgccggaatgagc
atacaaatgcatgattatccgccctttgcgttggccttcgatgaaatggtcggtcggcgt
atagcgaatatggacctggaacagacggtgtattccgacggcaaactatcggaaaacgag
ttgacgttggaattcgccgagttattgcaacgttctggcacttgggggcaggagtttccg
gagccggttttcgatggcgtattcgaagtcattcaggcccgtatcgtcgggcagcatcat
ttaaaactggtgctgcgtcaggccgaaaacaagcagttgatcgacgcgattgcgtttttt
atcgaaaagccagaacaatggctgggaattcgaacgatccatgctgcttacaagcttgat
atcaatgaataccgaggcaatcgagccctacaatttgtgattcagtatctggaaaaactc
aattaa
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