Methanosarcina barkeri Wiesmoor: MSBRW_1042
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Entry
MSBRW_1042 CDS
T03839
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRW_1042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbw03021
]
MSBRW_1042
Enzymes [BR:
mbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRW_1042
Transcription machinery [BR:
mbw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRW_1042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKB50295
UniProt:
A0A0E3QHW0
LinkDB
All DBs
Position
1273433..1276075
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AA seq
880 aa
AA seq
DB search
MANVPPIPKRISSIKFGLLSPKEIRKMSSTPIITADTYDDDGFPIDMGLMDTRLGVIDPG
LRCKTCSGRAGECPGHFGHIELVAPVVHVGFNKVIRKLLRATCRKCSRLLLDPAQKQHFL
DQLIGIEEIGHMPDDLINEAYKEASKVKTCPYCNEEQLEIKFEKPTEYLENGEKLTPTEI
RDRFENIPDDDIRVIGMDPKNARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLV
DIIRINQRFQENREAGAPQLIIEDLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQ
RLKGKEGRFRGSLSGKRVNFSARTVISPDPNLSINEVGVPMPIARILTMPSVVTPRNIEQ
LKIYVRNGEDIHPGANYVLRPDGRRIKVTNVNKDDLAEKLEFGWTVERQLKDGDIVLFNR
QPSLHKMSIMAHSVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHALQTEESRAEAKILMQ
VQENILSPRFGGPIIGGIHDHISGLFLLTRFENHIYADDAYDMLRKSNIRELPSPAGYDP
DGKPYWTGKQIFSQILPKNLNTQFAAQVCSHCDICKKEECPNDAYVVIRDGELIKGTIDE
AAIGAFKGKVQDRIIKEIGPEVGARFIDNMTMLAVRAIMRTGLSFGIADEDIPKEARIQI
NEVLGKAEDAVQNLIKSYQNKELEPLPGRTLDETIEMSIMQKLGKARDETGNIADSHMGL
ENSAVIMARSGARGSILNLTQMAACVGQQAVRGERIRRGYAGRTLPHFQKGDLGSDAHGF
VKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDT
RGVLVQFKFGEDGINPTKSDFSKPDTIHRIVRSVANREVA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtacctccaattccgaaaagaatttcttctattaaattcggcttactgtct
ccaaaagagatccgtaaaatgagttcaactccgatcatcacagccgacacttacgacgat
gacggatttccaattgacatggggcttatggacacgaggctcggagttattgacccaggg
cttcgctgcaagacatgttcagggcgagcaggtgaatgtcctggacacttcgggcacatc
gaacttgtcgccccggtagtccatgttggtttcaataaagtaatccgaaaacttctcagg
gctacctgcaggaaatgcagcaggctactgcttgaccctgcacagaaacagcattttctg
gaccagcttataggcattgaggaaatcggacatatgcccgatgacctgattaatgaggct
tataaggaggccagcaaagtaaagacctgcccttactgcaatgaggaacagctggaaatt
aaattcgaaaaacccactgaatatctcgaaaatggggagaagctgactcctaccgagata
agggaccgttttgagaatatccctgacgacgacatccgggttatcgggatggacccaaag
aatgcaaggcctgaatggatgatacttacagttctgcctgtaccacctgttacagttcgt
ccttcgattacccttgagtccgggcagcgtagtgaagacgacttgacccacaaactcgta
gatattatcagaattaaccagcgcttccaggaaaacagggaagctggtgctcctcagctc
attattgaggacctctgggaactccttcagtatcacgttacaaccttctttgacaattct
gtctcagggatacctcctgcaaggcacaggtcaggcagacccttaaaaaccctttcccag
cgtttaaagggcaaggaaggacgtttcagaggaagtctctcgggtaaacgtgttaacttc
tcggctcgtacggtaatttctccggatccaaacttgagtattaatgaagtaggggttcct
atgcccattgcacggatccttacaatgccctcggtggtaacaccaaggaatatagagcag
ctcaaaatttacgtgcgcaatggggaggatatacacccaggagcgaactacgtactgcgt
cctgacggcaggcgtataaaagttaccaatgtaaacaaagatgaccttgccgaaaaactg
gagttcggatggacagttgaacgccagttaaaagatggagatattgtactctttaacaga
cagccgtctctgcacaagatgagtattatggctcattctgtgaaggtgcttccgaataag
actttcaggctgaatcctgctgtatgccctccatataacgctgactttgatggggatgag
atgaacatgcacgcccttcagaccgaagagtccagggctgaggcaaagatcttgatgcag
gttcaggaaaacattctttctccacgtttcggcggtcctattataggtgggatccatgac
catatttcaggacttttcctgctgacacgttttgagaaccacatctacgccgatgacgct
tatgatatgctccggaagagcaatatccgagagctgccttcccctgcaggatacgatccc
gatggaaagccctactggacaggaaagcaaatcttcagccagatcttgcctaaaaacctt
aatacacagtttgcagcccaggtctgctcgcactgtgacatctgcaagaaagaggagtgc
ccgaacgatgcctatgtggtaatccgggacggagagctcattaaaggaacgatagacgag
gccgccatcggagcattcaaaggaaaagttcaggaccgtattatcaaggaaataggccct
gaagtcggagctcgctttatagataatatgaccatgcttgcagttagggctattatgcgg
acaggcttgagcttcggaattgctgatgaagatattccgaaagaagccaggatccagatc
aatgaagtcctcggcaaagctgaagatgctgtgcagaacctcatcaagtcttatcagaat
aaggagcttgaacctcttcctggaagaaccctcgatgagacaatcgaaatgagcatcatg
caaaagcttggaaaggccagagacgagacaggtaacatagcagacagccatatggggctt
gaaaactcggcagttatcatggcccgttctggggcaagaggttccatcctgaaccttact
cagatggcagcctgtgttggtcagcaggccgtgcgtggagaacgtatccgcagaggatat
gcaggcaggacattaccccatttccagaagggagaccttggttcggacgctcacgggttc
gtaaaggcaagctacaagagcggacttaatccaactgaatatttcttccatgcaatcggt
ggtagggaaggtcttgtggacactgcggtcaggacatcacaatcagggtacctgcagaga
aggcttgtcaatgcgctccaggacctggaagttcagtacgacctcacggtcagggatacc
agaggtgtgctcgtgcagtttaaattcggagaagatgggattaaccccacaaaaagcgat
ttcagcaaacccgatacaatccataggattgtccgttctgtagcaaaccgggaggtggcc
tga
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