Methanosarcina barkeri MS: MSBRM_2496
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Entry
MSBRM_2496 CDS
T03838
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSBRM_2496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mby03400
]
MSBRM_2496
Enzymes [BR:
mby01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSBRM_2496
DNA repair and recombination proteins [BR:
mby03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSBRM_2496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AKB55494
UniProt:
A0A0E3QXF6
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All DBs
Position
complement(3298258..3298959)
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AA seq
233 aa
AA seq
DB search
MIVDSKLSPEVLTRYFRLNDNLPSIYESINRDLLIDRAIRKYRGLRLIRQDPWECLISYM
LSTASSIPTIQKRICLLSRSFGQEIEPGYFSFPDPETLANVDPSELDKCKLGFRTQNIIA
AAEEVASGELDLDVLFRLEYRYARERLMRLRGIGEKVADCVLLFAFDKMEAFPVDTHIRQ
IIQHYHIDDSYFETCKNMSCMGDWGREYFGHYCGYAQEYLYYQKRMEGFVSLY
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttgattgttgattctaaactctcgcctgaggttcttactcgttatttccgcctgaacgac
aacctgccttctatttacgaaagcataaaccgggatctgctgatcgacagagcaatccgc
aaatatcggggcctgcggctgatcaggcaggacccctgggaatgccttatttcatatatg
ctctctacagcctcaagcattcccacaatccaaaaacgaatctgcttgctcagccggtct
ttcggtcaagaaatcgagccaggatatttcagctttcctgaccctgaaactcttgcaaat
gtcgatccctccgagcttgacaaatgtaagctgggcttcaggacccagaatataatagcc
gcagccgaagaagttgcgtcgggcgagctggaccttgacgtgcttttccgcctggagtac
aggtatgcgcgggaacgccttatgaggctcaggggcataggggaaaaagttgctgactgc
gtgcttcttttcgcttttgataaaatggaagcttttccagttgatacccacatcaggcag
atcatccagcattaccatatagatgacagttactttgaaacctgcaaaaacatgagctgt
atgggggactggggaagggaatattttggacactactgcgggtatgcccaggagtatttg
tattatcagaaaaggatggaagggtttgtaagtctttattga
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