Micromonospora carbonacea: HXZ27_13740
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Entry
HXZ27_13740 CDS
T06722
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mcab
Micromonospora carbonacea
Pathway
mcab00040
Pentose and glucuronate interconversions
mcab01100
Metabolic pathways
mcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HXZ27_13740
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HXZ27_13740
Enzymes [BR:
mcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HXZ27_13740
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QLD25140
UniProt:
A0A7H8XKG3
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Position
complement(3327422..3328981)
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AA seq
519 aa
AA seq
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MRRPVPLRLHAAVAATVIGAAICVALPTPQASAATGGVTGYATQNGGTTGGAGGQTVRAT
TGTAIHTALCTRASSSTPIIIQVEGTINHGNTAKVSGNSCNTNAGLIELKQISNVTIVGV
GSGAVFDQLGIHIRDSSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESTVRNVWVDHVTLE
ASGGEAEGFDGLFDMKDNVQYVTLSYSILRNSGRGGLVGSSESDLGNNYITFHHNLYENL
DSRAPLLRGATAHMYNNSYVNLRESGINSRAGAKAKVENNYFKDSKDVLGTFYTNERGTW
QVAGNIFDNVTWSSPGNENYPAGPNPTSTTTVTIPYSYRLDGASCVPNLVRQTAGANKGL
QVSDGSCTPQTPAPTTPAPTTPTPGPTTPTPGPTNPGGTNLSLGAGADGSSKADGSSYGN
VLDGNLGTYWSPSGSTGRISVKWDAAVRVGSVNIREASGATGVIRSWRLVNNDTGAVLAS
GSNGVGVVSFSPTSLKKINLEITGATGTPRVAEFETYAG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagtcccactgcgactccacgcggccgtggccgcgacggtcatcggtgcc
gcgatctgcgtggcgctgccgacgccccaggcgtcggcagcgaccggcggcgtgaccggc
tacgcgacccagaacggcgggaccaccggcggcgcgggcgggcagacggtgcgggccacc
accgggaccgcgatccacacggcgctgtgcacccgggccagcagcagcaccccgatcatc
atccaggtcgaggggaccatcaaccacggcaacaccgccaaggtctccggcaacagctgc
aacaccaacgccggcctgatcgagctcaagcagatcagcaacgtcacgatcgtcggcgtc
ggcagcggggccgtcttcgaccagctcggcatccacatccgcgactccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtcgggctcgcccacctccaatggcggc
gacgccatcggcatggagagcaccgtccgcaacgtctgggtcgaccacgtcaccctggag
gcctccggcggtgaggcggagggcttcgacggcctgttcgacatgaaggacaacgtgcag
tacgtgacgctgtcctacagcatcctgcgcaactccggccgtggtggcctggtcggctcc
agcgagagcgacctggggaacaactacatcacgttccaccacaacctgtacgagaacctc
gactcgcgcgcgccgctgctgcgcggcgccacggcccacatgtacaacaactcgtacgtc
aacctgcgcgagtccggcatcaactcccgggccggcgcgaaggccaaggtggagaacaac
tacttcaaggactccaaggacgtcctgggcaccttctacaccaacgagcgcggcacctgg
caggtcgccggcaacatcttcgacaacgtgacctggtccagccccggcaacgagaactac
cccgccgggccgaacccgacctccaccaccaccgtcaccatcccctactcctaccgcctc
gacggggccagctgcgtgcccaacctggtgcgccagacggccggggccaacaagggcctc
caggtgtccgacggcagctgcacgccgcagaccccggccccgaccacgcccgcgccgacc
accccgacccccgggccgaccaccccgacgccggggccgaccaacccgggcgggacgaac
ctcagcctcggggccggcgcggacggctccagcaaggccgacggcagcagctacggcaac
gtgctggacggcaacctgggcacctactggtcgccgtccggctccaccggccggatctcg
gtcaagtgggacgccgccgtccgggtcggctcggtgaacatccgcgaggcctccggcgcg
accggcgtcatccgttcctggcggctggtcaacaacgacaccggggcggtcctcgcctcg
ggcagcaacggggtgggcgtcgtgtccttcagccccacctcgctgaaaaagatcaacctg
gagatcaccggcgcgaccggcacgccgcgggtcgccgagttcgagacgtacgccggctga
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