Mytilus californianus (California mussel): 127720536
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Entry
127720536 CDS
T08804
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127720536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127720536
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127720536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
CSTF1_dimer
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_EIPR1
eIF2A
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Ge1_WD40
Beta-prop_SPT8
Cytochrom_D1
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_NWD2_C
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
127720536
NCBI-ProteinID:
XP_052083089
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MTGGGYAEIKQRELMYRLMISQLFYDGHQQLAVTLSNLVKAHPACPPSDRLFTVVKYGLD
VEEEITGTKQNTTESTIPGTGIDLEFTTDVQTISPEAALYETCYVTAHKGPCRAAAFHPS
GKLIATGSEDASIKILDVERMLSKSATPAEIIAMETPQQAMENHPVIRTLYDHADEVTTL
DFHPQHQILASAGKDFSIRFFEYSKPSVKKAYKSIQEATEVRCISFHPSGDYILVGTQHP
TLRLYDVNTFQCFVARDPSHQHKGPITCAKWSPNANMYVTSSKDGDIKVWDGVGNVVINT
FTKAHDGNEVCSVMFSRNGKYVLSSGKDSLVKLWELSTNRCLIMYTGAGATGKQEHRTQA
VFNHTEDYILFPDEKTTSLCCWDSRNAERQRLLALGHNGAVRYIAHSPTGPAFITCSEDF
RARFWYRKADSD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgactggaggaggttatgcagaaataaagcaacgagagcttatgtacagacttatgatc
agtcagttattctatgatggacatcaacaattagctgtgacattatctaaccttgtcaag
gctcatccagcatgtcctccatcagatagactcttcacagtcgtcaaatatggactagat
gtggaagaagaaatcactggcaccaagcaaaatactacagaaagcaccatcccaggaact
ggtatagatctggagtttaccacagatgttcagacaatctcaccagaggcagctctctat
gaaacttgttatgtaactgcacacaaaggaccatgtcgggcagcagctttccatcctagt
gggaaattaattgcaacaggatcagaggatgcatccatcaagattttagatgtagaaaga
atgttgtcaaagagtgccacaccagcagaaatcattgccatggaaacaccacaacaagct
atggagaatcatccagtcatcagaactctttacgatcatgcagatgaagtgacaacatta
gactttcaccctcagcatcagattttagcatcagcaggcaaagatttcagcattagattc
tttgaatactccaaaccatccgtaaagaaggcatataaaagtatacaggaagcaacagaa
gtacggtgtatatcatttcatccttcaggggactatatcttagtgggcactcagcatcca
acattacgactttatgatgtgaacacattccagtgtttcgtagccagagatcccagtcat
caacacaaaggaccaattacatgtgcaaaatggagtcctaatgctaacatgtatgtgacc
tcgtctaaagatggagatataaaagtttgggatggtgttggaaatgtggtcattaataca
tttacaaaggcacatgatggcaatgaagtgtgttctgtaatgttctcaagaaatggaaag
tatgtgttatctagtgggaaggattcgctggttaagttatgggaactgtctaccaataga
tgtctgattatgtacacaggagctggggccacagggaaacaagaacacaggacacaggct
gtatttaaccatacagaggattacattttatttcctgatgaaaagaccacaagtttgtgt
tgctgggattctagaaatgctgaaagacaaagattgttagcattagggcataacggtgca
gtaagatatattgctcattctccaacaggaccagccttcatcacatgcagtgaggatttt
agagcaagattctggtacagaaaagccgattcagactga
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