KEGG   Mus caroli (Ryukyu mouse): 110284425
Entry
110284425         CDS       T05910                                 
Symbol
Tubb6
Name
(RefSeq) tubulin beta-6 chain
  KO
K07375  tubulin beta
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04145  Phagosome
mcal04517  IgSF CAM signaling
mcal04540  Gap junction
mcal04814  Motor proteins
mcal05010  Alzheimer disease
mcal05012  Parkinson disease
mcal05014  Amyotrophic lateral sclerosis
mcal05016  Huntington disease
mcal05020  Prion disease
mcal05022  Pathways of neurodegeneration - multiple diseases
mcal05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    110284425 (Tubb6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110284425 (Tubb6)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    110284425 (Tubb6)
  09142 Cell motility
   04814 Motor proteins
    110284425 (Tubb6)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110284425 (Tubb6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110284425 (Tubb6)
   05012 Parkinson disease
    110284425 (Tubb6)
   05014 Amyotrophic lateral sclerosis
    110284425 (Tubb6)
   05016 Huntington disease
    110284425 (Tubb6)
   05020 Prion disease
    110284425 (Tubb6)
   05022 Pathways of neurodegeneration - multiple diseases
    110284425 (Tubb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcal03036]
    110284425 (Tubb6)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcal04812]
    110284425 (Tubb6)
   04147 Exosome [BR:mcal04147]
    110284425 (Tubb6)
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110284425 (Tubb6)
Cytoskeleton proteins [BR:mcal04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110284425 (Tubb6)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110284425 (Tubb6)
  Exosomal proteins of colorectal cancer cells
   110284425 (Tubb6)
  Exosomal proteins of bladder cancer cells
   110284425 (Tubb6)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 110284425
NCBI-ProteinID: XP_021005815
Ensembl: MGP_CAROLIEiJ_G0022367
UniProt: A0A6P5NV70
LinkDB
Position
18:64096030..64108218
AA seq 447 aa
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYV
PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG
LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVNDGEEAFEDEDEEEINE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggagattgtgcacatccaggcgggccagtgcgggaaccagatcggtaccaagttt
tgggaagtgatcagtgatgagcacggtatcgaccaggccggaggctacgtgggcgactca
gcgctgcagctggagaggatcagcgtctactacaatgagtcatcctctaagaagtacgta
cccagggctgccctggtggacttggagcccggcaccatggacagtgtgaggtctgggcct
tttgggcaactcttcaggcctgataacttcatcttcggacagacgggtgccgggaacaac
tgggccaagggtcactacacggagggcgcggagctggtggattcggtgctggatgtggtg
cgcaaggagtgtgagcattgcgactgtcttcagggcttccagctcacgcactcgctgggc
ggtggcacgggctcaggcatgggcacactgctcatcagcaagatccgagaggagtacccg
gaccgcatcatgaacaccttcagcgtcatgccgtcacccaaggtctcagacaccgtggtg
gagccctacaatgccacattgtcggtgcaccagctggtggagaacaccgacgagacctac
tgcatcgacaacgaggccctctatgacatctgcttccgcacgctcaagctgaccacaccc
acttacggggacctcaaccacttggtatccgccaccatgagcggtgtcaccacatcactg
cgtttccctggccaactcaacgccgacctgcgcaagctggctgtgaacatggtgccattc
ccacgtctccacttctttatgcccggcttcgcccccctcacagcccggggcagtcagcag
taccgtgccctgacagtgcctgagctcacacagcagatgttcgatgccaagaacatgatg
gctgcctgtgacccacgccatggccgctacctgaccgttgccactgtcttccggggcccc
atgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaacagcagctac
tttgtggagtggatccccaacaatgtcaaggtagccgtgtgcgacatcccaccacggggc
ctgaagatggcctccaccttcattggcaatagcactgccatccaggagctattcaagcgc
atctccgagcagttctcggccatgttccgccgcaaggccttcctgcactggttcaccggc
gagggcatggacgagatggagttcaccgaggccgagagtaacatgaatgacctggtgtcc
gagtaccagcagtaccaggacgccacggtcaatgatggcgaagaggcatttgaagacgag
gatgaagaagagatcaatgaatag

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