Mus caroli (Ryukyu mouse): 110290875
Help
Entry
110290875 CDS
T05910
Symbol
Ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04010
MAPK signaling pathway
mcal04014
Ras signaling pathway
mcal04020
Calcium signaling pathway
mcal04151
PI3K-Akt signaling pathway
mcal04210
Apoptosis
mcal04722
Neurotrophin signaling pathway
mcal04750
Inflammatory mediator regulation of TRP channels
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05216
Thyroid cancer
mcal05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110290875 (Ntrk1)
04014 Ras signaling pathway
110290875 (Ntrk1)
04020 Calcium signaling pathway
110290875 (Ntrk1)
04151 PI3K-Akt signaling pathway
110290875 (Ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110290875 (Ntrk1)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
110290875 (Ntrk1)
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
110290875 (Ntrk1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110290875 (Ntrk1)
05202 Transcriptional misregulation in cancer
110290875 (Ntrk1)
05230 Central carbon metabolism in cancer
110290875 (Ntrk1)
09162 Cancer: specific types
05216 Thyroid cancer
110290875 (Ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcal01001
]
110290875 (Ntrk1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110290875 (Ntrk1)
Protein kinases [BR:
mcal01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
110290875 (Ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
LRR_8
I-set
Ig_3
TrkA_TMD
LRR_NXF1-5
C2-set_2
LRR_4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
110290875
NCBI-ProteinID:
XP_021013390
Ensembl:
MGP_CAROLIEiJ_G0025140
UniProt:
A0A6P5P948
LinkDB
All DBs
Position
3:complement(80539165..80556018)
Genome browser
AA seq
799 aa
AA seq
DB search
MLRGQRLGQLGWHRPAAGLGSLMTSLMLACASAASCREVCCPVGPSGLRCTRAGSLDTLR
GLRGAGNLTELYVENQQHLQRLEFEDLQGLGELRSLTIVKSGLRFVAPDAFRFTPRLSHL
NLSSNALESLSWKTVQGLSLQDLTLSGNPLHCSCALFWLQRWEQEGLCGVHTQTLHDSGP
GDQFLPLGHNTSCGVPSVKIQMPNDSVEVGDDVFLQCQVEGLALQQADWILTELEGAATV
KKFGDLPSLGLILVNVTSDLNKKNVTCWAENDVGRAEVSVQVSVSFPASVHLGLAVEQHH
WCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTQFLESALTNETMRHGCLRLNQPTHVNNG
NYTLLAANPYGQAAASVMAAFMDNPFEFNPEDPIPVSFSPVDGNSTSRDPVEKKDETPFG
VSVAVGLAVSAALFLSALLLVLNKCGQRSKFGINRPAVLAPEDGLAMSLHFMTLGGSSLS
PTEGKGSGLQGHIMENPQYFSDTCVHHIKRQDIILKWELGEGAFGKVFLAECYNLLNDQD
KMLVAVKALKEASENARQDFQREAELLTMLQHQHIVRFFGVCTEGGPLLMVFEYMRHGDL
NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLASLHFVHRDLATRNCL
VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFSTESDVWSFGVVL
WEIFTYGKQPWYQLSNTEAIECITQGRELERPRACPPDVYAIMRGCWQREPQQRLSMKDV
HARLQALAQAPPSYLDVLG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaggccagcggctcgggcagctgggctggcatcgcccggccgcggggctaggc
agtctgatgacttcgttgatgctggcctgtgcctccgctgcatcctgtcgcgaggtctgc
tgtcccgtgggcccctcggggctgcgctgcaccagggcagggtccctggataccctccgc
ggcctgcggggcgccgggaacctgacggagctctacgtggaaaaccagcagcacctgcaa
cgcctggagtttgaggacctgcagggcctgggggagttgagaagcctaaccatcgtgaag
agcggcctccgctttgtggccccagatgccttccgtttcacccctcggctcagtcacctg
aatctgtcctccaatgcgttggagtccctctcctggaaaactgtgcaggggctctcccta
caggacctgaccctgtcagggaacccactacactgttcctgtgccctgttctggctccag
cgttgggagcaggaagggctgtgtggtgtgcatacacagacgcttcatgactcagggcct
ggagaccagttcctcccactgggacacaacaccagttgtggtgtaccctcagtgaagatc
cagatgcccaatgactctgtggaagtgggggatgacgtgtttctgcagtgccaggtggag
gggctggccctacagcaggctgactggatcctcacagagctggaaggggcagccaccgtg
aagaaatttggagatctgccatccctggggctaattctggtcaatgtcaccagtgatctc
aacaagaagaatgtgacgtgctgggcagagaatgatgtgggccgggccgaggtctctgtc
caagtcagcgtctccttcccagccagtgtgcacctgggcttagcggtggagcagcatcat
tggtgcatccccttctcggttgatgggcagccagcaccgtctctgcgctggttgttcaat
ggctctgtgctcaacgagaccagtttcatcttcactcagttcttggagtcggcgctgact
aatgagaccatgcggcacggctgcctgcgcctcaatcagcccacgcatgtcaacaacggg
aactacaccctgctggcggccaacccctacggccaggctgctgcctccgtcatggctgct
tttatggacaacccttttgagttcaaccctgaggaccccatccctgtctccttctcgcca
gtggacggtaacagcacatcaagagacccagtggagaagaaagatgaaaccccttttggg
gtctctgtggctgtgggcctagccgtctctgccgccctcttcctttctgccctcctcctt
gtgctcaacaaatgtggacagaggagcaaatttgggatcaaccgccctgctgtgctagct
ccagaggatgggctggccatgtccctacacttcatgacactgggtggcagttctctttcc
cctactgagggcaaaggctccggactccagggccacatcatggagaacccacagtacttc
agtgatacctgtgtccatcacatcaagcgccaggacatcattctcaagtgggagctaggg
gagggagcctttggaaaggtctttcttgccgagtgctacaaccttctgaatgatcaggac
aagatgctggtggctgtcaaggcactgaaggaggcatccgagaatgctcggcaggacttt
cagcgtgaggccgagctgctcaccatgctacagcaccagcacatcgtgcgcttctttgga
gtctgcaccgagggtggcccgttgctcatggtctttgagtacatgcgccacggggacctc
aaccgtttcctccggtcccacggacctgatgcaaagctgctggctggtggtgaggatgtg
gctcctggtcctctgggccttgggcagcttctggctgtggctagccaggtggctgctggt
atggtatatctagccagcctgcactttgtgcaccgggatctggccacacgcaactgtctg
gtgggtcagggactagtggtgaagattggagactttggcatgagcagagacatctacagc
acagactattaccgagtgggaggtcggaccatgctgcccatccgctggatgccacccgag
agcatcctctaccgcaagttcagcaccgagagcgatgtgtggagcttcggggtggtgctc
tgggagatcttcacctatggaaagcagccctggtaccagctctccaacactgaggcgatc
gagtgtatcacgcagggccgggagctggagcggccgcgcgcctgccctcctgatgtctat
gccatcatgcgaggctgctggcagcgagaacctcagcaacgcctcagcatgaaggatgtg
catgcgcgtctgcaggccctggcacaagcgccacccagttacctggacgttctgggctag
DBGET
integrated database retrieval system
