Mus caroli (Ryukyu mouse): 110292982
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Entry
110292982 CDS
T05910
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04151
PI3K-Akt signaling pathway
mcal04510
Focal adhesion
mcal04512
ECM-receptor interaction
mcal04820
Cytoskeleton in muscle cells
mcal04974
Protein digestion and absorption
mcal05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110292982 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110292982 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110292982 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110292982 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110292982 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110292982 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcal00535
]
110292982 (Col9a2)
Proteoglycans [BR:
mcal00535
]
Extracellular matrix (ECM) proteoglycans
Others
110292982 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110292982
NCBI-ProteinID:
XP_029332259
Ensembl:
MGP_CAROLIEiJ_G0026420
UniProt:
A0A6P7QZH7
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Position
4:111557269..111570858
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AA seq
604 aa
AA seq
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MGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGTPGPKGDPGPE
GPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPQGLQGVKGHPGKRGILGDPG
RQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGEMGPRGYKGMVGSIGAAGPRG
EEGPRGPPGRTGEKGDVGSQGARGPQGITGPKGITGPPGIDGKDGTPGIPGMKGSAGQVG
RPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPGVSGPPGKEGEPGPRGEIGPQGIMG
QKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPG
VAGLPGEKGEKGQSGEPGLKGQQGVRGETGYPGPSGDAGAPGVQGYPGLPGPRGLVGDRG
VPGQPGRQGVVGRAASDQHIVDVVLKMIQEQLAEVAVSAKREALGAAGMVGLPGPPGPPG
YPGKQGPNGHPGPRGIPGIVGAVGQIGNTGPKGKRGEKGDRGEMGRGHPGMPGPPGIPGL
PGRPGQAINGKDGDRGSPGAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARLTEPGS
IKGP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggagccaagggagagcctggtcccatggggacccctggagtcaagggccagccaggg
ctcccagggccccctggcctgccgggccctggttttgctggacctcccggaccacctgga
cctgttggcctccctggtgagattggaaccccaggccccaagggggatccaggaccagag
ggaccatcagggcccccagggccccctgggaaaccaggccgaccaggaaccatccagggc
ttggaagggagtgcggatttcttgtgtccaaccaactgtccagctggtgtgaagggtcct
cagggtttgcaaggagtgaagggtcatccaggcaaacgggggattctgggtgatcctggt
cgccaggggaagccaggtcccaagggagatgtgggtgcctctggagagcaaggcatccct
ggaccaccgggcccccaaggcatcaggggctacccaggcatggcaggacccaagggagag
atgggtcctcgtggctataaaggcatggtgggctccattggggctgcagggccacggggt
gaagaaggcccaagagggccaccaggccgaaccggtgagaagggggatgtggggagccaa
ggtgcccgaggaccccaggggataacaggcccaaagggaataaccggtccaccaggcatt
gatggcaaggatgggaccccaggcattcctggcatgaagggcagtgcaggacaagtggga
cggccaggaagcccaggccaccagggcttagcgggtgtgccgggtcagcctggaacaaaa
ggaggtcctggagacaagggtgaaccaggccagcagggcttgccgggagtctctggtccc
cctgggaaagaaggggagccagggcctcgaggagaaattggtccacagggcatcatggga
cagaagggcgaccagggtgagagggggccagtgggacagccaggccctcaaggacgacag
ggccccaaaggagagcagggccctccaggaattccaggaccccaaggcttgccaggcatc
aaaggagataagggttccccagggaagaccgggccccgaggcggagtgggtgacccgggg
gtggccggcctcccgggagagaaaggagagaagggccagtcaggcgagccagggcttaag
ggacagcaaggagtccgtggagagaccggctaccccggccccagcggagatgccggtgcc
ccaggagtgcagggctatcccgggctcccggggccccgaggactggtgggagatcgaggc
gtgccaggacaacccgggagacagggtgtggtgggccgagctgccagtgaccagcacatc
gtggatgtggtgctgaagatgattcaagagcaacttgccgaggtagctgtgagtgccaag
cgagaagccctgggtgcagcagggatggtgggccttccaggacctcctgggccccctgga
tatccaggcaaacagggacccaatgggcatcccggcccccgaggcattcctggcatcgtg
ggagcagtgggtcagattggcaacactggacccaagggaaagcgtggagagaagggggat
cgaggagaaatgggtcgtggccatccagggatgcctgggcccccagggatcccaggtctt
cctggccggcctggccaggcaatcaatggcaaggatggggaccgaggatctccaggggct
ccaggagaggctgggagacctggccggccaggcccagtggggctaccaggtttctgtgag
cctgccgcatgcctgggagcttcagcctatacctctgctcgcctcacagagcctgggtcc
atcaaggggccatga
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