Mus caroli (Ryukyu mouse): 110293763
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Entry
110293763 CDS
T05910
Symbol
Prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110293763 (Prdm13)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110293763 (Prdm13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
ZrgA
Motif
Other DBs
NCBI-GeneID:
110293763
NCBI-ProteinID:
XP_021017287
Ensembl:
MGP_CAROLIEiJ_G0025843
UniProt:
A0A6P5PMB6
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All DBs
Position
4:complement(16794828..16803255)
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AA seq
754 aa
AA seq
DB search
MPAHVTPRTEDARRGAGPSSACGCSWFCHLRPVEDPASPSVCLAAVATMHGTSRTSATSV
NADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIGLIR
AARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPITATPTHDEK
GEERYICWYCWRTFRYPNSLKAHLRFHCVLSGGGGRAFLPQEHAARPGASPVAEGLGLPP
KPTVPDLTAPVQAVALRPQAPAAQLAQACGARESIKREASLAPLATSPPPGKWGTPKKGK
EQPDRAHSQFLGIVGGSSGGSGGLPFYPGVRSAFKPAGLARVAAQSDPYREEGGGKGPGL
ALGRLLGGGRAGGRPGSGESPAGHHHHHHHAHHHHHHHPKCLLAGEPPPAGLPCPGALRA
FPLLAGHPEEASAFKHVERAPPAAATTSLPSARYAALPAPGLPVERCALPPLDAGSLKAY
PGGGGGGECSPLPAVMPAFTVYSGDLLYGPPAAYYPLKLHLGGLLKYPESISYLSGPAAA
AAAAAAAAAAAAAIGPAELGSLASIDREIAMHTQQLSEMAAGKGRARLDSGTLPPAVVAA
TGPGGGGGGGSAAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDP
SNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLMAKAGDGPGAEPSYA
LEPGDPKSEDSDVDVCFTDDQSDPEAGGRGEHDS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccacgtcactccgcggacagaagacgcacgtcggggtgcgggtccctcctct
gcatgcggctgctcctggttctgtcacttgcgccccgtggaggaccccgcgagccccagc
gtctgcctggcggcggtggcaacaatgcacggaacttcccgcacttcggccaccagcgtg
aacgctgactgctgcatcccggctggcttgcgccttgggccggtgcctggcaccttcaag
ctgggcaagtacctgtcagatcgcagggaaccagggcccaagaaaaaggtgcgcatggtg
agaggggagctggtggacgagtcagggggctcccctctggagtggatagggttaatccgg
gcagccaggaatccccaggaacagactctggaagctattgcagacttaccaggaggacag
atcttctatcgggcattgcgagacgtccagcctggggaagagctgactgtgtggtattct
aactccttggctcagtggtttgacatccctataactgcgactccaactcatgatgagaaa
ggggaggagcgctacatctgctggtactgctggaggacctttcgctaccctaacagcctc
aaggcacacctgcggttccactgcgtcctcagcggcggcggcggccgtgcctttctgccc
caggagcacgcggcccggcccggcgcttccccggtggcagaaggcctcggcctccctccg
aaacccaccgtcccggacttgacggcgcccgtccaggcagtggctttgcggcctcaagcg
ccggccgctcagctcgcccaggcgtgcggggcgcgggaaagcatcaagcgggaggcttcc
ctggcgcccctggccacctccccgccgccgggcaaatggggaacgcccaagaagggcaag
gagcagccggaccgcgcgcacagtcaattcctggggatcgtgggcggctcctcgggcggc
agcggaggcctgccattctacccaggcgtgcgctcggctttcaagccggccggcctggcc
cgggtggctgcgcagagcgacccctaccgggaagagggaggcggcaagggaccggggctg
gcgctagggcggctgctgggcgggggccgggccggcgggcgtccgggcagtggggagagc
ccggcgggccaccaccaccatcaccaccacgctcaccaccaccaccaccaccaccccaaa
tgcctgctggcgggggagccgccgccggcgggcctgccgtgtcccggggccctgcgagcc
ttccccctgctcgccggccacccggaagaggcgtcggccttcaagcacgtggagcgggct
ccgcccgccgccgccaccacctcgctgccctccgcgcgctacgccgctctcccggctccc
gggctccccgtggagcgctgcgcgctgccgcccctcgacgccggcagcctaaaggcgtac
cccggcggcggtggcggcggcgagtgcagccccctgcccgccgtcatgccggcctttacg
gtgtacagcggagacctgctctacggccctccggccgcctattaccctctcaagctgcac
ttgggcgggctgctcaaatacccggagtccatctcctatctgagcggccccgcggcggca
gcggcggcggcggcagcggcagcggcggcggcggcggcgatcgggccggccgaactgggc
tccctggccagcatcgaccgcgagatcgccatgcacacacagcagctgtccgagatggca
gccgggaagggtcgcgcccgcctggactcggggacgctgcctccagccgtagtggcggcg
acgggccccgggggtggcggcggtggcgggagcgcggcaggcaagcccaagacgggccac
ttgtgcctctattgtggcaagctgtactcgcgcaagtacgggctcaagatccacatgcgg
acgcacacgggctacaagccgctcaagtgcaaagtgtgcctgcggcccttcggcgacccc
agcaatctcaacaagcacatccgactccacgccgagggcaatacgccctaccgctgcgag
ttctgcggcaaggtgctagtgcgccgccgagacctggagcgtcacgtcaagtcccgccac
ccaggccagagcctgatggccaaggcgggcgatggcccgggcgcggagcccagctatgct
ctggagcctggggatcccaagagcgaggacagtgatgtggatgtctgcttcactgacgat
cagagcgaccctgaggctgggggtcgtggtgagcacgactcctaa
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