Mus caroli (Ryukyu mouse): 110296178
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Entry
110296178 CDS
T05910
Symbol
Slc6a11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04082
Neuroactive ligand signaling
mcal04721
Synaptic vesicle cycle
mcal04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110296178 (Slc6a11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110296178 (Slc6a11)
04721 Synaptic vesicle cycle
110296178 (Slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110296178 (Slc6a11)
Transporters [BR:
mcal02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110296178 (Slc6a11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110296178
NCBI-ProteinID:
XP_021020415
Ensembl:
MGP_CAROLIEiJ_G0028742
UniProt:
A0A6P5PX24
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Position
6:109240132..109359789
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AA seq
627 aa
AA seq
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MTAEQALPLGNGKAAEEARGSETLGGGGGGAAGTREARDKAVHERGHWNNKVEFVLSVAG
EIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRRV
CPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEKCVEFQK
LNFSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWK
GTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQ
IFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGV
PIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDM
YPKVFRRGYRRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECV
CIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYT
YPAWGYGIGWLMALSSMLCIPLWIFIKLWKTEGTLPEKLQKLTVPSADLKMRGKLGASPR
TVTVNDCEAKVKGDGTISAITEKETHF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagcaagcgctgcccctgggcaacgggaaggcggccgaggaggcgcggggg
tccgagacgctgggcggcggcggcgggggcgcggcggggacgcgcgaggcgcgcgacaag
gctgtccacgagcgcggccactggaacaacaaggtggagttcgtgttgagcgtagcggga
gagatcatcggactgggcaacgtgtggcgctttccctacctgtgctacaagaacggcgga
ggggcattcctgattccttacgtggtgtttttcatctgctgcggaatccccgtcttcttc
ctggaaacggctctgggacagttcacgagcgagggtggcatcacgtgctggaggagggtc
tgcccgttatttgaaggcattggctacgcaacacaggtgatcgaagcacacctcaatgtc
tactacatcatcatcctggcgtgggccatcttctacctaagcaattgcttcaccaccgag
ctcccctgggccacctgtgggcacgagtggaacacagagaaatgtgtggagttccagaag
ctgaacttcagcaactacagccatgtgtccctgcagaatgccacctccccggtcatggag
ttctgggaacgccgggtcttggctatatccgatggcattgagcacattgggaacctccgt
tgggaactggcattatgtctcctggcagcctggaccatctgctacttctgcatatggaag
ggtactaagtcaactggaaaggtcgtgtatgtcactgcaaccttcccctacatcatgctg
ctgatcctcctgatccgaggggtcacgttgcctggcgcctctgaaggcatcaagttctat
ctgtaccctgacctctcccggctctctgacccacaggtgtgggtggatgctgggacacag
atctttttctcctatgccatctgcctgggctgcctaaccgctctggggagttacaacaac
tataacaacaactgctacagggactgcattatgctctgctgtctaaacagtggcaccagc
tttgtagctgggtttgccatcttctcagtcctgggcttcatggcatatgagcagggtgtg
cctattgccgaggtggcagagtcaggtcctggactggctttcatcgcctaccccaaggct
gtcactatgatgcccctctctccactgtgggccaccttgttcttcatgatgctcatcttc
ctgggcctggacagtcagtttgtgtgtgtggagagtcttgtgacagccgtggtagacatg
taccccaaggtcttccggcggggctaccggcgagaactgctcatcctggccctgtccatc
atctcctatttcctaggcctggtgatgctgaccgagggaggcatgtacatcttccagctt
tttgactcatacgccgccagtggcatgtgcttgctctttgtggccatctttgagtgtgtc
tgcatcggctgggtatatggaagcaaccggttctatgacaatattgaggacatgattggt
taccggccactgtcactcatcaagtggtgctggaaagtcgtgacccctgggatctgtgcg
ggcatcttcatcttcttcctggtcaagtacaaaccgctcaagtacaacaatgtgtacaca
tatcctgcttggggctatggcatcggctggctcatggctctgtcctccatgctgtgtatc
ccactctggatcttcattaagctgtggaagacagagggcacactgcccgagaaattacag
aagttgacagtccccagcgccgatctgaaaatgcggggcaagcttggggccagcccacgg
acggtgaccgttaatgactgtgaggccaaggtcaagggtgacggcaccatctctgccatc
acagagaaggagacacacttctga
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