KEGG   Mus caroli (Ryukyu mouse): 110304786
Entry
110304786         CDS       T05910                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110304786 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcal03041]
    110304786 (Sf3a1)
Spliceosome [BR:mcal03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110304786 (Sf3a1)
 Complex B
    110304786 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    110304786 (Sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 110304786
NCBI-ProteinID: XP_021032038
Ensembl: MGP_CAROLIEiJ_G0016029
UniProt: A0A6P5QM56
LinkDB
Position
11:981877..1005004
AA seq 791 aa
MQAGPVQAVPPPPPVATESKQPIEEEASSKEDPTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDQEKAEETPSQLDQDTQVQDMDEGSDDE
EEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPA
SKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEET
AIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTK
EKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPPM
ASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVP
APAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKL
NGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIH
LALKERGGRKK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgcaggccggacccgtgcaggcggtgcccccgccgccgcctgtagccactgagtccaaa
cagccaattgaagaagaagcatcgtcaaaggaggatcccaccccgtccaagccagtggtc
ggcattatttacccgcctccggaggtcaggaacatcgtcgacaagactgccagttttgtg
gccagaaatgggcctgaatttgaagctaggattcgacagaatgagatcaacaatcccaag
ttcaatttcttaaatcccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggagccctcagctgccatccccaaggttatgcagcagcag
cagcaagctacgcaacagcagctgccccagaaggtccaagcccaggtgatccaagagacc
atagtgccgaaggagccccctcctgagtttgagttcatcgctgatcccccctccatctca
gccttcgatctggatgtagtgaagctgacagctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgactttctccgaccc
cagcacagcctcttcaactacttcacaaagctggtggagcagtataccaagatcttgatt
ccacccaaaggcttattttcaaagctcaagaaagaggctgaaaatcctcgagaagttttg
gaccaggtttgttaccgagtagaatgggccaaatttcaggaacgtgagaggaagaaggaa
gaagaagagaaagagaaggagcgagtagcttatgctcagattgactggcatgattttgtg
gtggtggagacagtggattttcaacccaatgagcaaggaaacttcccaccaccaacaaca
ccagaggagctgggagctcggatcctcattcaggagcgctacgagaagtttggggagagc
gaggaagtggagatggaggttgagtcagatgaggaagatcaggagaaggccgaggagact
ccttcccagctggaccaggatacccaagtacaggacatggatgagggttcagacgatgaa
gaagaagggcagaaagtgcctccacccccagagacacccatgcctccacctctgccccca
acaccagaccaagtcattgtgcggaaggactatgatcccaaagcttccaagccccttcct
ccagcccctgctcctgatgagtatcttgtatcccccatcactggggagaagattcctgcc
agcaaaatgcaagagcacatgcgcattgggcttcttgacccccgctggctggagcagcgg
gaccgctccatccgagagaagcagagtgatgacgaggtttatgcaccaggtctggatatt
gagagcagcttaaagcagttggctgagcgacgtactgacatctttggggtagaagagaca
gccattggtaagaagattggtgaagaggagatccagaagcccgaggagaaggtgacttgg
gatggccattcaggcagcatggcccggacccagcaggctgcccaggccaacatcaccctc
caggagcagattgaggccatccataaggccaagggcctggtgccagaagatgacactaag
gagaagattggccctagcaagcccaatgaaatccctcagcagccaccacctccatcttca
gccaccaatatccccagctcagcaccccctattacatcagtgccccggccacctgcgatg
ccacctccagtccgcaccactgttgtatctgcagtacctgtcatgcctcggccacccatg
gcatctgtggtccggctgcccccaggctcagtgattgcccccatgccacccatcatccac
gcacccaggatcaatgtggtacctatgcctcctgcagcacctcccatcatggcgccccgc
ccacctcccatgattgtgccaacagcctttgtgcctgccccacctgtggctccagtccca
gccccagctccaatgcctcctgtacaccccccacctcctatggaggatgagcctccatcc
aagaaactaaagaccgaggacagtctcatgcccgaggaagaattcctgcgcaggaacaag
ggtccagtatccatcaaagtgcaggtacccaacatgcaggataagacggaatggaagctg
aatggtcagggtctggtcttcactctcccactcacagaccaggtctctgtcatcaaagtg
aagattcatgaagccacgggcatgcctgcggggaaacagaaactacagtatgaaggcatc
ttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtcatccac
ttggccctcaaggagagaggcggcaggaagaagtag

DBGET integrated database retrieval system