Mus caroli (Ryukyu mouse): 110307282
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Entry
110307282 CDS
T05910
Symbol
Dnmt3a
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00270
Cysteine and methionine metabolism
mcal01100
Metabolic pathways
mcal04148
Efferocytosis
mcal05206
MicroRNAs in cancer
Module
mcal_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
110307282 (Dnmt3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110307282 (Dnmt3a)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110307282 (Dnmt3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110307282 (Dnmt3a)
03032 DNA replication proteins [BR:
mcal03032
]
110307282 (Dnmt3a)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110307282 (Dnmt3a)
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
110307282 (Dnmt3a)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110307282 (Dnmt3a)
DNA replication proteins [BR:
mcal03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
110307282 (Dnmt3a)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110307282 (Dnmt3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNM3A_N
ADD_DNMT3
DNMT3_ADD_GATA1-like
DNA_methylase
PWWP
Motif
Other DBs
NCBI-GeneID:
110307282
NCBI-ProteinID:
XP_029340205
Ensembl:
MGP_CAROLIEiJ_G0017575
UniProt:
A0A6P7RGC4
LinkDB
All DBs
Position
12:602393..707790
Genome browser
AA seq
908 aa
AA seq
DB search
MPSSGPGDSSSSSLEREDARKEGEEQEENRGKEERQEPSATARKVGRPGRKRKHPPVESS
DTPKDSAVTTKSQPMAQDSGPSDLLPNGDLEKRSEPQPEEGSPAAGQKGGAPAEGEGTET
PPEASRAVENGCCVTKEGRGASAGEGKEQKQTNIESMKMEGSRGRLRGGLGWESSLRQRP
MPRLTFQAGDPYYISKRKRDEWLARWKREAEKKAKVIAVMNAVEENQASGESQKVEEASP
PAVQQPTDPASPTVATTPEPVGGDAGDKNATKAADDEPEYEDGRGFGIGELVWGKLRGFS
WWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSFCSAFHQATYNKQPM
YRKAIYEVLQVASSRAGKLFPACHDSDESDSGKAVEVQNKQMIEWALGGFQPSGPKSLEP
PEEEKNPYKEVYTDMWVEPEAAAYAPPPPAKKPRKSTTEKPKVKEIIDERTRERLVYEVR
QKCRNIEDICISCGSLNVTLEHPLFIGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGR
EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSR
LQMFFANNHDQEFDPPKVYPPVPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASE
VCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLY
EGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKE
VSAAHRARYFWGNLPGMNRPLASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGK
DQHFPVFMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAP
LKEYFACV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccctccagcggccccggggacagcagcagctcctctctggagcgggaggatgctcga
aaggaaggagaggaacaggaggagaaccgtggcaaggaagagcgccaggagcccagtgcc
acggcccggaaggtggggaggcctggccggaagcgcaagcacccaccggtggaaagcagt
gacacccccaaggactcagcggtgaccaccaagtctcagcccatggcccaggactctggc
ccctcagatctgctacccaatggagacttggagaagcggagtgaaccccaacctgaggag
ggaagcccagctgcagggcagaagggtggggccccagctgaaggagagggaactgagacc
ccaccagaagcctccagagctgtggagaatggctgctgtgtgaccaaggaaggccgtgga
gcctctgcaggagagggcaaagaacagaagcagaccaacatcgaatccatgaaaatggag
ggctcccggggccgactgagaggtggcttgggctgggagtccagcctccgtcagcggccc
atgccaagactcaccttccaggcaggggacccctactacatcagcaaacggaaacgggat
gagtggctggcacgttggaaaagggaggctgagaagaaagccaaggtaattgcagtaatg
aatgctgtggaagagaaccaggcatctggagagtctcagaaggtggaggaggccagcccc
cctgctgtgcagcagcccacggaccctgcttctccgactgtggccaccacccctgagcca
gtaggaggggatgctggggacaagaatgctaccaaagcagccgacgatgagcccgagtat
gaggatggccggggctttggcattggagagctggtgtgggggaaacttcggggcttctcc
tggtggccaggccgaattgtgtcttggtggatgacaggccggagccgagcagctgaaggc
actcgctgggtcatgtggtttggagatggcaagttctcagtggtgtgtgtggagaagctc
atgccgctgagctccttctgcagtgcattccaccaggccacctacaacaagcagcccatg
taccgcaaagccatctatgaagtcctccaggtggccagcagccgtgccgggaagctgttt
ccagcttgccatgacagtgatgaaagtgacagtggcaaggctgtggaagtgcagaacaag
cagatgattgaatgggccctcggtggcttccagccctcgggtcctaagagcctggagcca
ccagaagaagagaagaatccttacaaggaagtttacactgacatgtgggtggagcctgag
gcagctgcttacgccccacccccaccggccaagaaacccagaaagagcacaacagagaaa
cctaaggtcaaggagatcattgatgagcgcacaagggagcggctcgtgtatgaggttcgc
cagaagtgcagaaacatcgaggacatttgtatctcatgtgggagcctcaatgtcaccctg
gagcacccactcttcattggtggcatgtgccagaactgtaagaactgcttcttggagtgt
gcttaccagtatgacgacgatgggtaccagtcctattgcaccatctgctgtggggggcgt
gaagtgctcatgtgtgggaacaacaactgctgcaggtgcttttgtgtcgagtgtgtggat
ctcttggtggggccaggagctgcccaggcagccattaaggaagacccctggaactgctac
atgtgtgggcataagggcacctatgggctgctgcgaagacgggaagactggccttctcga
ctccagatgttctttgccaataaccatgaccaggaatttgaccccccaaaggtttaccca
cctgtgccagctgagaagaggaagcccatccgtgtgctgtctctctttgatgggattgct
acagggctcctggtgctgaaggacctgggcatccaagtggaccgctacattgcctctgag
gtgtgtgaggactccatcacggtgggcatggtgcggcaccagggaaagatcatgtacgtc
ggggacgtccgcagcgtcacacagaagcatatccaggagtggggcccattcgacctggtg
attggaggcagtccctgcaatgacctctccatcgtcaaccctgcccgcaagggactttac
gagggtactggccgcctcttctttgagttctaccgcctcctgcatgatgcgcggcccaag
gagggagatgatcgccccttcttctggctctttgagaatgtggtggccatgggcgttagt
gacaagagggacatctcgcgatttcttgagtctaaccccgtgatgattgacgccaaagaa
gtgtctgctgcacacagggcccgttacttctggggtaaccttcctggcatgaacaggcct
ttggcatccactgtgaatgataagctggagctgcaagagtgtctggagcacggcagaata
gccaagttcagcaaagtgaggaccattaccaccaggtcaaactctataaagcagggcaaa
gaccagcatttccccgtcttcatgaacgagaaggaggacatcctgtggtgcactgaaatg
gaaagggtgtttggcttccccgtccactacacagacgtctccaacatgagccgcttggcg
aggcagagactgctgggccgatcgtggagcgtgccggtcatccgccacctcttcgctccg
ctgaaggaatattttgcttgtgtgtaa
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