Mus caroli (Ryukyu mouse): 110308244
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Entry
110308244 CDS
T05910
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110308244 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110308244 (Ttc37)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110308244 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_16
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_11
ARM_TT21_C
TPR_9
ARM_TT21_2nd
ANAPC3
Sel1
TPR_15
Fis1_TPR_C
ANAPC8
SNAP
BTAD
TPR_30
TPR_20
Motif
Other DBs
NCBI-GeneID:
110308244
NCBI-ProteinID:
XP_021036330
Ensembl:
MGP_CAROLIEiJ_G0018735
UniProt:
A0A6P7QH22
LinkDB
All DBs
Position
13:70840967..70930422
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPEQLLAWQGLASLYEKCNHVNAKDDLPGVYQKLLELYGSVDRQKWCDVCK
KLVALYHQEKKHLEVARTWHRLIKTRQEDGADRQELFELWRKLSQLLAENIEDQNNETQQ
MLLTAFENALDLADNIPSEDHQVLYRNFIQCLSKFPHETTKLKKACEEMITIYPTVQYPL
EVICLYLIDSGSLTSEGHQYCYKLVEMNSKSGPGLIGLGIIALQDKKYEDAVSHLTDGLK
ESPLCIAGWCHLAEAQVKMHRPKEAILSCNQALKTIDNVGASGGSLHQRNLCLRLKAEAL
LKLSDGASSEEAVRTLDQISDVDNTPGLLVLQGLACLNTGAVDKATKIMEDLVTSYPDLA
EAHTLEGRVHFTKKDYVQAEVSFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDRTKALT
HFLKAARLDAHMGKVFCYLGHYYRDVAGDRNRARGCYRKAFELDDSDAESGAAAVDLSLE
LEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQAALRADPKDCNC
WESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVASIQQILGRYSEAIAQYQLIIK
MKEDYVPALKGLGECHLLLGKVALVDFLDGKAVDYVEQALGYFTRALQHRADVSCLWKLV
GDACTCLHPVSPSKVRVHVLGALLGQKEGQEVLKKDELLSLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAETGSSMNDLTELLEKSLHCLKKAVRLDSNNHLHWNALGVVACYHGV
GNYALAQHCFIKSIQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAERVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILEMN
AIPAAQGVLCKYVERIQNSASAFTMLGYLNEHLQLKKEAAEAYQRATALLRSAEDQHTYN
VAVRNWGRLLCSIGDYDRAIQAFKSTPLVELEDIIGFALALFMKGLYKESGSAYERALTV
CKSEQDKAHILTAMAIMEYKQGKMDAAKSFLFKCSILKEPTAESLQALCALGLAMHDATL
SKAALNELLKHIKRKNDYHSCLLTAAIYALQGRSVAVQRQAAKAVHSNPADPALWSLLSR
IVAQYTHRSAKGGAVAGSVAHILDLNHGKKALLYTAVNQLAVGSSTAEDKSNTALKTIQK
AAFLSPDDPAVWAGLMAACHADDKLALLNNTQPKRVDLYLALRSAVAASLKDKEILQNYN
QSLEKWSFSQVVTGLIDTGKTSEAESLCTQSLKSNPDQPAVILLLRQVQCRSLLESQKPL
PDAVLEELQKTVMSNSASVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGNWSGKLS
SLLKLALLALEVCMANVSGDHWSSLVQEATSEALKVCFSPLAVFLQALLQFNRKMGARET
RRLLERVVYQTGYPSSIVSAARWYLLRHLYAKDDPELIDVLVRNAETHGDKRILELNRKL
SAQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagaagtgaagactgctctaaaaagtgcaagagatgcaatcagaaacaaa
gagtacaaagaagctttgaagcattgcaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgaactagaacagcctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccggaacagctactcgcctggcaggggcta
gcgagtttgtatgagaagtgcaatcacgtaaatgctaaggatgatttacctggtgtttac
cagaagctgttggagctctatggaagtgttgacagacagaagtggtgtgacgtgtgtaag
aaacttgtggctctctatcaccaggaaaagaaacacctagaggtggctcggacatggcat
agattgataaagacacggcaggaagatggagcagacagacaagagctttttgagctgtgg
aggaaattgagtcaattgctggctgagaatatagaagatcagaataatgagacccagcag
atgcttttaactgcatttgagaatgcactggacttagcagataacattcccagtgaagat
caccaagtactttacaggaatttcattcagtgtttatctaaatttcctcatgagacgact
aagttgaagaaggcctgtgaagaaatgataactatctatcctaccgtacagtacccacta
gaagtgatttgtttgtatttaattgactcagggagcctgaccagtgagggacaccagtat
tgttacaagctagtggaaatgaattcaaaaagtggtccaggccttattggcttaggcatt
atagctttacaagacaagaagtatgaagatgctgttagtcatctaacagatggcttgaag
gaaagccctctctgcatagctgggtggtgtcatcttgccgaagcccaagtcaaaatgcac
agacctaaggaagctattctttcttgcaatcaagctctgaagaccatagataacgttggt
gcatcaggtggcagtcttcatcagaggaatctctgtcttcgtctgaaagcagaggctttg
cttaaactctcagatggtgcatcttcggaggaggcagtccgtacccttgatcagatttct
gacgtagataataccccaggactgctggttctccaaggcctcgcctgtctgaacacaggc
gctgtggacaaggctacaaagatcatggaagaccttgtaacttcttaccctgatctagct
gaggctcacactcttgagggtcgggttcactttactaagaaggactacgtgcaagcagaa
gtaagtttccaaagagcacttgagaaagatgctgaagttgctgaatatcattaccagctt
ggactgacatactggttcatgggtgaagaaacaagaaaagacagaacaaaggctcttacc
cactttctaaaggctgcgagactggatgcacacatgggtaaagttttctgctacttaggc
cattattaccgagatgtggctggagatagaaacagagcccgagggtgttacaggaaagct
tttgaattagatgacagtgatgctgagtctggagctgctgcagttgacctgagcctggag
cttgaagacacggaaactgctttagctatcttgacagcagtaactcagaaggcaagtgct
ggagcagctaagtgggcgtggctgaggagaggactctaccatttgaaagctggccaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggactgcaattgc
tgggaatccttaggagaggcatacttaagcagaggtggctacaccacagccttgaagtct
tttatgaaagccagtgagctcaacccagactccacatacagtgtgtttaaggtggcatcg
atacagcaaatcctaggcaggtactcagaggcgattgcacagtatcagctgatcattaaa
atgaaagaagattatgtgcctgccttaaaaggtttgggtgagtgccacctgttgctgggg
aaggtggccttagtggattttctggatggaaaagctgtggactatgtggaacaagcgctg
ggatatttcacccgggccctgcagcatcgagctgatgtgtcttgcctttggaaacttgtg
ggagatgcctgtacctgtctgcatcctgtttcgccatctaaagtgcgtgttcatgtctta
ggagcccttctcggccaaaaagaagggcaagaagtcttaaagaaagatgagctcctgagt
cttggaggaaggtgttacggtcgtgcattaaaattgatgtctacatctaatacatggtgt
gaccttggaatcaattattaccgtcaagtacaacatctagcagaaacaggcagcagcatg
aatgatcttactgagttactggagaaatctttgcattgtctgaaaaaggcagtgaggctg
gacagtaataatcacttacattggaatgctcttggtgtggttgcatgttaccatggagtt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccaggcagaacaaattaat
gctgctgcatggaccaacttaggagtgttataccttgcgactgaaaacatcgagcaagcc
catgaagcgttcaaaatggctcagtcccttgatccatcttatttattgtgctggattgga
caggctcttattgcagaaagagttggaagttatgataccatggatctcttcaggcacact
acagagctcagtatgcatactgaaggagcaataggttatgcatattgggtttgtactaca
ttacaagacaagagcaacagagaaacagagctgtaccagtacaacatccttgaaatgaat
gctatccctgcggcacagggcgttctctgtaaatatgtagaaagaattcagaattccgct
tcagctttcacaatgttgggttatttaaacgagcatctgcagctgaaaaaggaagccgcc
gaggcgtaccagagggcaactgcactgttacgttctgctgaagaccaacatacttataat
gttgcagtaagaaactggggtagattgttatgctccattggtgactatgacagagctatc
caggcctttaagtcgacgccccttgtggagctggaggacatcattgggtttgcactggca
ttgtttatgaagggcctatataaagagagcggctcagcctatgagagagccttgactgtt
tgtaaatcagagcaagacaaagctcacatcttgacagctatggcaataatggaatataaa
caagggaaaatggatgcagccaagtcatttctcttcaaatgctctattttaaaggaacca
actgcagaaagtcttcaagcactgtgtgctctagggttggcaatgcacgatgccacactg
tcaaaagcagcactgaatgagttactgaagcatatcaaacgcaaaaacgattatcacagc
tgccttcttacggcagcaatttatgcactacagggccgcagtgtggcagtacaaagacaa
gcggccaaggctgtgcacagtaaccctgctgaccctgctctttggtctttgctttctcga
attgttgctcagtacacacatcggagcgcaaagggaggtgctgtagctggcagtgtggct
catattctggatttgaatcatggaaagaaggcattattatatactgcagtgaaccagttg
gccgtgggaagcagtacagcagaagataaaagcaatactgctctaaagaccattcagaag
gcagccttcctttctccagatgaccctgctgtctgggctgggctgatggcagcctgccat
gcagatgataaactggctttactcaataacactcagccaaagagggtagatttgtacttg
gcattgcggtctgctgttgctgcttcacttaaggacaaagaaattttgcaaaattacaac
cagtcgcttgaaaagtggtctttctcacaagttgtcactggtctgattgacacaggaaaa
acatctgaagctgaatctctgtgcacacagagtttgaaaagtaaccctgaccagccagct
gttatcttactgttgagacaagttcagtgtagatcactcctggagtcacagaagcccctc
ccagatgctgtactggaagaactgcaaaaaacggtcatgtccaactcagcctctgtcccg
gcatggcagtggttggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatg
tgttacagaaagagtctccaagtggcatcccaacagggcaactggagtgggaagctctcg
agtctgttgaagctagcccttcttgcattggaagtgtgcatggctaatgtttcaggtgat
cactggtcatccttggttcaagaagccacaagtgaggccttgaaggtttgctttagccct
ctggctgtcttcttgcaagcattgttacagttcaaccgtaagatgggagcaagagagaca
cggcggcttttggagagagtcgtgtaccagactggataccccagctcaattgtatcagcc
gctcggtggtacctcttaagacacctctatgcgaaagatgaccctgaactcattgatgtg
ttggtgaggaatgcggagactcacggtgataaaagaattttggaactgaatcggaagctg
tcagcccagtga
DBGET
integrated database retrieval system
