Mus caroli (Ryukyu mouse): 110309334
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Entry
110309334 CDS
T05910
Symbol
Trim13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110309334 (Trim13)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110309334 (Trim13)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110309334 (Trim13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
ATP-synt_E_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110309334
NCBI-ProteinID:
XP_021037591
Ensembl:
MGP_CAROLIEiJ_G0019386
UniProt:
A0A6P5R5W9
LinkDB
All DBs
Position
14:52738797..52746368
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AA seq
407 aa
AA seq
DB search
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE
TSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCVTDMQLICGICATR
GEHTKHVFSSIEDAYARERNAFESLFQSFETWRRGDALSRLDTLETNKRKALQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQTYDPEINKINTILQEQRMAFNIAEAFK
DVSEPIIFLQQMQEFREKIKVIKETPLPHSNLPTSPLMKNFDTSQWGDIKLVDVDKLSLP
QDTGVLTSKIPWYPYLLLMMVVLLGLLIFFGPTVFLEWSPLDELATWKDYLSSFNSYLTK
SADFIEQSVFYWEQMTDGFFILGERVKNVSLVALNNVAEFICKYKLL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcttgaggaagacctcacgtgcccaatttgctgcagtttgtttgatgacccc
cgagtgttgccctgctcacacaacttctgcaaaaaatgcttagaagggctcttagagggg
aatgtgaggaattccctgtggagaccatctccattcaagtgtcctacctgccgtaaggaa
acctcagctactggagtcaatagtctgcaggtcaattactccctaaagggtatcgtggag
aaatacaacaaaatcaagatttctcccaaaatgccagtgtgtaaaggacatttggggcag
cctctcaacattttctgtgtaactgatatgcagctgatttgtgggatctgtgctactcga
ggcgaacacaccaagcatgtcttctcctctattgaagatgcctacgctcgagaaaggaat
gcctttgagtccctctttcagagttttgagacttggcgccggggagatgctctttcccgc
ttggatactttagaaacaaacaagaggaaagccctccagttactcacgaaggattcagat
aaagtaaaggagttttttgagaagttacagcacaccttggatcaaaagaagaatgaaatc
ctgtctgactttgaaactatgaagcttgcagttatgcagacctatgacccggagatcaac
aaaatcaacactattctacaggagcagcggatggccttcaacattgctgaggctttcaaa
gatgtctcagaacctattatatttttgcaacagatgcaagagttcagggagaaaatcaaa
gtaatcaaggaaactcctttgccacattctaatttgcccacaagccctttaatgaagaac
tttgataccagtcagtggggagacattaaactagttgatgtggataaactgtctttgcct
caagacacaggtgtgctcactagcaagattccctggtacccctatctgctgctcatgatg
gtagttttactgggtctcctcatattctttggccccactgtattcctggagtggtctcca
cttgatgaattggcaacttggaaagactatctttcaagcttcaattcttacctgactaaa
tcagctgattttatagaacaatcggttttttactgggaacagatgacagatgggtttttc
attttgggtgaaagagtaaaaaatgttagtttggtggcactgaacaatgtagcagaattt
atatgcaaatacaaactattataa
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integrated database retrieval system
