Mus caroli (Ryukyu mouse): 110309847
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Entry
110309847 CDS
T05910
Symbol
Sftpd
Name
(RefSeq) pulmonary surfactant-associated protein D
KO
K10068
pulmonary surfactant-associated protein D
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110309847 (Sftpd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110309847 (Sftpd)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mcal04091
]
110309847 (Sftpd)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Phagocytosis
Opsonins
110309847 (Sftpd)
Lectins [BR:
mcal04091
]
C-Type lectins
Collectins
110309847 (Sftpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Surfac_D-trimer
Motif
Other DBs
NCBI-GeneID:
110309847
NCBI-ProteinID:
XP_021038237
Ensembl:
MGP_CAROLIEiJ_G0019145
UniProt:
A0A6P5R1A9
LinkDB
All DBs
Position
14:complement(33077490..33090524)
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AA seq
374 aa
AA seq
DB search
MLPVLSMLVLLVQPLGNLGAEMKTLSQRSVPNTCTLVMCSPTENGLPGRDGRDGREGPRG
EKGDPGLPGPMGLSGLQGPTGPVGPKGENGSAGEPGPKGERGLSGPPGLPGIPGPAGKEG
PSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSTGAKGSTGPKGERGAPGVQGAPGNAG
AAGPAGPVGPQGAPGSRGPPGLKGDRGAPGDRGIKGESGLPDSAALSQQMEALKGKLQRL
EAAFSHYQKAALFPDGRSVGDKIFRTADSEKPFEDAQEMCKQAGGQLASPRSATENAAIQ
QLITAHNKAAFLSMTDVGTEGKFTYPTGEPLVYSNWAPGEPNNNGGAENCVEIFTNGQWN
DKACGEQRLVICEF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgttctctccatgcttgtcttgcttgtacagcccctgggaaatctaggagca
gaaatgaagaccctctctcagagatcagtacccaacacctgcaccctagttatgtgtagc
ccgacagagaatggcctgcctggtcgtgatggacgggatgggagagaaggtccacggggt
gagaagggtgatccaggtttgccaggacctatggggctctcagggttgcagggccctaca
ggtccagttgggcccaaaggagagaatggctctgctggcgaacctggaccaaagggagaa
cgtggactaagtggacctccaggacttccaggtattcctggtccagctgggaaagaaggt
ccctctgggaagcaggggaacataggacctcaaggcaaaccaggtcctaaaggagaggct
gggcccaaaggagaagtaggtgctcctggcatgcaaggatctaccggggcaaaaggctcc
acaggccccaagggagaaagaggtgcccctggtgtgcaaggagccccggggaatgctggg
gcagcaggacctgctggacctgtcggtccacagggagctccaggttccagggggccccca
ggactcaagggggacagaggtgctcctggagacagaggaatcaaaggtgaaagcgggctt
ccagacagtgctgctctgagccagcagatggaggccttaaaaggaaaactacagcgtcta
gaggctgccttctctcactatcagaaagctgcactgttccctgatggccgaagtgttgga
gacaagatcttcaggacagcagactctgaaaagccttttgaggatgcccaggagatgtgc
aaacaggctggaggacagctggcctccccacgttctgctactgagaatgctgccatacag
caactgatcacagcccacaacaaagctgccttcctgagtatgacagatgtgggcacagag
ggcaagttcacttaccccacaggagagcccctggtctattctaattgggctccaggagag
cccaacaacaatggtggagcagagaactgtgtggagatcttcaccaatgggcaatggaat
gacaaggcttgtggagagcagcgccttgttatctgtgagttctga
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