Mycoplasma capricolum subsp. capripneumoniae F38: MCCPF38_00649
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Entry
MCCPF38_00649 CDS
T03703
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mcap
Mycoplasma capricolum subsp. capripneumoniae F38
Pathway
mcap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCCPF38_00649 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcap03019
]
MCCPF38_00649 (rny)
Messenger RNA biogenesis [BR:
mcap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCCPF38_00649 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CEA12006
LinkDB
All DBs
Position
1:complement(676621..678150)
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AA seq
509 aa
AA seq
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MNDDIIILLSVFCGIFFICFIICSSIALYLWKSKSRKRLVEQYTKEAKQAKKQILANGYK
EISEAKMLFLKRSELEKNELDRVKEQLELRSNDLKRNQEIVESKSQRLDASLLDLEKRKF
LLDKKEEYLIKVLEDASGLTKSQAKELLIKQVKNKSEKELISILKNAELQAHSNSKMIAN
NIIISAMERIKVELTSQRTTNIVKLPSDVLKGRIIGKDGRNMKAFEQIGGVDIVIDEIPN
TVVVSSFNPIRREIATRTLEQLIIDGRIQPVKIENELKKQEQELEYIIQETGLSTIKELN
INDIDIELVKLIGKLKFRTSYGQNVLAHSIEVAKLSGAIASELGLDVEKAIRAGLLHDIG
KAIDFEKQGSHVVLGAEIAKKYNEDPIVINCIESHHEDKEKESEIAAIVAIADSISASRP
GARYNAIDEFILRMTEIEKIGNSIPGVAKTYALQSGRQIRLIVDPLVASDLDLAMILEKM
KEEIKNKVIIPGEITITVIRERKETDVLK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgacataattatattactctcagttttttgtggtatattttttatttgcttt
attatttgtagttctattgctttgtatttatgaaaatctaaatcaagaaaacgtcttgtt
gaacaatatacaaaagaagccaaacaagcaaaaaaacaaattttagctaatggatataaa
gaaattagtgaagcaaaaatgctttttttaaaaagaagtgaattagaaaaaaatgaatta
gatagagtaaaagaacaattagaactaagaagtaatgacttaaaaagaaatcaagaaata
gttgaatctaaatcacaaagattagatgctagtttattagatttagaaaaaagaaaattt
ttattagataaaaaagaagaatatttaattaaagttttagaagacgcttctggcttaact
aaatctcaagcaaaagaattattaataaagcaagtaaaaaataaatcagaaaaagaactt
atttctattttaaaaaatgctgaattacaagcacatagtaattctaaaatgattgctaat
aacattataatttcagcaatggaaagaattaaagtagaacttacaagtcaaagaacaact
aatattgttaaattaccatctgatgttcttaagggtcgtattataggtaaagatggtaga
aatatgaaagcttttgaacaaattggtggagttgatattgttattgatgaaataccaaac
actgttgtagtttcttcttttaatccaattagaagagaaatagcaacaagaacattagaa
caattaattattgatggtagaattcaaccggttaaaattgaaaatgaattaaaaaaacaa
gaacaagagttagaatatataattcaagaaactggtttaagtactattaaagaattaaat
attaatgatattgatattgaattagttaaattaattggtaaattaaaatttagaactagt
tatggacaaaatgttttagctcattcaattgaggttgctaaattatctggagctattgct
tctgaactaggtttagatgttgaaaaagcgattagagcaggattattacatgatattggt
aaagctatagattttgaaaaacaaggtagtcacgttgtattaggtgcagaaattgctaaa
aaatataatgaagatccaattgttataaattgcatcgaatctcatcatgaagataaagaa
aaagaaagcgaaatagctgctattgtagctattgctgattctatttcagcttcaagacct
ggagctagatataatgcaattgatgaatttattttaagaatgactgaaattgaaaagatt
ggtaattctattccaggagttgctaaaacatatgcattacaatctggtcgtcaaattaga
ttaatagttgatccattggttgcttctgatttagatctagctatgattttagaaaaaatg
aaagaagaaattaaaaataaagtaattattcctggtgaaataacaataacagtaataaga
gaaagaaaagaaactgatgttttaaaataa
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