Mycoplasmopsis canis LV: AAW50_01105
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Entry
AAW50_01105 CDS
T03936
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcas
Mycoplasmopsis canis LV
Pathway
mcas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAW50_01105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcas03021
]
AAW50_01105
03400 DNA repair and recombination proteins [BR:
mcas03400
]
AAW50_01105
Enzymes [BR:
mcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAW50_01105
Transcription machinery [BR:
mcas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAW50_01105
DNA repair and recombination proteins [BR:
mcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAW50_01105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DUF5887
Motif
Other DBs
NCBI-ProteinID:
AKF41036
LinkDB
All DBs
Position
complement(299744..303373)
Genome browser
AA seq
1209 aa
AA seq
DB search
MIEGTKKFVVRKFGPKTERRDYSVTKKSLELTDILSTSKESFDNFMKKRIQEVLLDVYPI
TTGNVKLDYVKNSVDVEYPFKKITSETEEINKCKAKGINFSSKIYIQLQKENTLTGERKT
DRVLLGEIPYMTSGGSFIINGSEKVIVSQLVRSPGAYFGIGVRNKQSDDLFNKLEILPRI
GSWLEISHKVTTNTLDTVKVKVDKNKNIQLGTFLASFGFNEKNIKKLFGSNALLDETLKK
DKILEKEHEDKEELINEAQEDIFRSIRKGDRDTADAKKSLLPGMLFDRRRYNLSETGRYM
LNNKLSLVDRITNTYLAQEIKNKNGEIIFEKGIFIDFELAKKIQESFNLGIVASEKLEDI
KPEHVYFKLYRPELTQNNPQNLFNNPELRKRIKVVKVKVYPNKKWMNDETKEPVIVIGND
PKSVEQHLLISDIIAAISYYFNLTDGVGQDDDPDSLVNKRIVSVGELIEGQLQLALTKLE
KTTKERIGAKDVEKVTAKNVTNNKLITNQFKSFFNTSKLSQFMDQINPLAEVSNKRRVTS
LGPGGLSRDTAQFEVRDVHSTHYGRICPIETPEGLNIGLILNFATYAKVDDKGFLKTPYY
KVNNGVVDYEDVRYLTASEEFGYSIAQSSVRVDENNKIIDEFLTIRRNYTYENGRSDDVD
FIEVSSKQIVSVAAAGIPFLENDDANRALMGANMQRQAVPLLQTEAPLIATGIEADIAKY
SSYNLVAKNAGKVTFVDGSRIHIQRKESTVTDKYTLRNFERSNQGTLIQQRPLVRIGDEV
EVGDILTDGSSFKDGELALGKNVLVGFTTWNGYNFEDAVIINERLVKNDVYTSIHIEEQT
IQFRTSRAGDDELTKEVPNASKYSLRNLDDDGIVKVGSEVYPGDILVGRVSPKGEENPSQ
EEKMLYAILGQRSPSTKDTSLKVKNGHSGTITHVEILSREKGDVLEEGIEKIVKVSIAQK
RKIKVGDKMAGRHGNKGVISIVLPEEDMPYLEDGTPLDIMLNPQGVPSRMNIGQILELHL
GMAARKLNVKFVSPSFDGVKKPDIEAALEEAGLDKTGKQVLIDPITGRKFDKPVSVGVMY
MLKLNHMVDDKMHARSVGPYSLITQQPLGGKSQNGGQRFGEMETWALESYGATNVLQEIL
TYKSDDIIGRNALYSALVSGKELPTPGTPESFNVLSYELKGLGMKLEQSYDDSNDDYQVL
QFESGGDGE
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaggcacaaaaaaattcgtagttcgtaagtttggtcctaaaaccgaaagaaga
gactattcggtaacaaaaaaatcattagaattaacggatatattaagcacaagtaaagaa
agttttgataactttatgaagaaacgtattcaagaagtattgcttgatgtttaccctatt
acaacaggtaacgttaaacttgattatgttaaaaactctgtagatgttgaatatcctttt
aaaaagataacaagtgaaacagaagaaatcaacaaatgtaaagcaaaaggaattaacttt
agttcaaaaatttacattcaacttcaaaaagaaaatactttaactggtgaacgtaaaaca
gatagagtattattgggagaaatcccttacatgacatctggtggtagtttcattatcaac
ggtagtgaaaaagttatagttagccagttagttcgttctccaggtgcatatttcgggatt
ggggtacgtaacaaacaatcagatgatcttttcaataaattagaaattttaccaagaatc
ggatcttgattagaaatttctcataaagttacaactaacacattagatactgtaaaagta
aaagttgataaaaacaaaaatattcagctcggaacttttttagcatcatttggatttaat
gaaaaaaatataaagaaactttttggttcaaacgctttacttgatgaaacacttaaaaaa
gacaaaatcttagaaaaagaacatgaagataaagaagaattaataaacgaggcacaagaa
gacatctttagaagtatcagaaaaggtgatcgtgatacagctgatgctaaaaaatcacta
ttacccggaatgttatttgacagaagaagatataacttatctgaaacagggcgttatatg
ttgaataataaactttctttagttgatcgtattacaaacacatatttagctcaagaaatt
aaaaacaaaaacggtgaaattatttttgaaaaaggtattttcattgattttgaattagct
aaaaaaattcaagaaagttttaatttaggtatagtagcttcagaaaaacttgaagacatt
aaacctgaacatgtttacttcaaactatatagaccagaattaactcaaaataatcctcaa
aacttatttaataatcctgagttaagaaaaagaataaaagtcgttaaagtaaaagtttac
ccaaataaaaaatgaatgaatgatgaaacaaaagaaccagttatcgttattggtaatgac
cctaaatcagtagaacaacatttattaatttcagatattattgctgcaattagctactac
tttaacttaactgatggtgtgggacaagatgatgatcctgattcattagtaaataaacgt
attgtttctgtcggcgaattaattgaaggacaattacaattagcattaacaaaattagag
aaaacaactaaagaacgtattggtgccaaagatgttgaaaaagtaacggccaaaaatgtt
acaaataataaacttattacaaatcaatttaaatctttcttcaatacttctaaactttca
cagtttatggatcaaataaacccattagccgaagtttcaaacaaacgtcgtgttacatct
ttagggcctggtggtcttagtcgtgatacagctcaattcgaagttcgtgacgttcactca
actcactatggaagaatttgtccaatcgaaactccagaaggattaaacattggattgatc
ttaaactttgcaacctatgcaaaagttgatgacaaaggtttcttaaaaactccatactac
aaagttaataatggagttgtagactatgaagacgttagatacttaacagcttctgaagaa
tttggttactcaattgctcaatcttcagttcgtgttgatgaaaataataaaattatcgat
gaatttttaacaatcagacgtaactatacatacgaaaacggtagaagtgatgatgttgat
tttatagaagtttcatcaaaacaaattgtttctgttgctgccgctggtattcctttcttg
gaaaatgatgatgccaaccgtgctcttatgggcgcaaacatgcaacgtcaagcagtacca
cttttacaaacagaagctcctttaatagcaacaggtattgaagctgacattgctaaatat
tcatcatataacttagtggcaaaaaatgcaggtaaagtaacatttgttgatggttcaaga
attcatattcaaagaaaagaaagtactgtaacagacaaatatactttaagaaatttcgaa
agaagtaatcaaggaacattaattcaacaaagaccacttgtaagaattggtgatgaagtt
gaagttggcgacattttaactgacggatcatcatttaaagatggagaattagccttaggt
aagaatgttcttgttggtttcacaacatgaaacggttataactttgaggatgctgttatt
attaacgaaagattagtaaaaaatgatgtttatacatcaatacatattgaagaacaaaca
atccaatttagaacatcaagagccggagatgatgaactaacaaaagaagttccaaatgct
tcaaaatactcattaagaaatcttgatgatgacggaattgttaaagttggatcagaagta
tatccaggtgatatattagttggtcgtgtttctcctaagggtgaagaaaacccatcacaa
gaggagaaaatgctttatgctattttaggtcaaagatctccttctacaaaagatacatca
ttaaaagttaagaatggacatagtggtacaatcacacatgttgaaattttatcaagagaa
aaaggtgatgttttagaagaaggtattgaaaaaatagtaaaagtttcaatcgctcaaaaa
cgtaaaatcaaagtcggtgataagatggccggtcgccatggaaacaaaggggttatttca
atcgttttaccagaagaagatatgccgtatttagaagacggaacaccacttgacattatg
cttaatcctcaaggggttccatcacgtatgaacattggtcaaatccttgagttacacctt
ggtatggctgcaagaaaactaaatgttaaatttgtttcaccttcatttgatggtgttaaa
aaaccagatattgaagcagcattagaggaagcgggattagacaagacaggaaaacaagtt
cttattgatcctattacaggtagaaagttcgataaacctgtttcagttggtgttatgtac
atgttgaaacttaaccatatggttgatgataagatgcatgcacgttcagttggtccatac
tcattaatcactcaacaaccattaggaggtaaatctcaaaatggtggtcaaagatttggg
gaaatggaaacatgagccttagaatcttatggagcaacaaatgttcttcaagaaattctt
acatataaatcagatgacattattgggcgtaatgcgctttatagtgctttggtatcagga
aaagaattacctacacctggtacaccagaatcattcaatgttcttagctacgaattaaaa
ggattaggaatgaaattagaacaaagttacgatgatagtaacgatgattaccaagtattg
caatttgaatcaggaggtgatggtgaataa
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