Mugil cephalus (flathead mullet): 124996970
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Entry
124996970 CDS
T08342
Symbol
taf1c
Name
(RefSeq) uncharacterized protein taf1c
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
124996970 (taf1c)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
124996970 (taf1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
124996970
NCBI-ProteinID:
XP_047426372
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All DBs
Position
19:21003575..21017927
Genome browser
AA seq
1095 aa
AA seq
DB search
MRDMDYQFPPQLFPSFYNCGPPNSNLKHCAGNWGSYNGVRLESVSGLPSSWTFTSKHQVR
GETWRVTEPVPLPLLSPKKAFLWPPKPPDVQDFTEHMENFFVDHSQDAFSCMSDVLGENF
NFKPGKKEKYRSESVSMWRVKSFLDRLKLKLCLKSYNCPAMNGYSSLLSDVVHDIPPDLL
GSLLQEELREQRKRLVFSDRATGGALAFVPFSHNDSSDSLHGCLLYPRKQGLDCLTFHKV
ELQHHKGGTSCVDTSSHDPLSFQLTAPIRQISFTSLFNEGCVGVRSDYLCGVWRFSESNE
PRLLQAVNTREMATCISVSPHILGEVLVASESGAANLWTVGKGMQKVRVEDSNLYFNAKS
SWRWCEFSAHPRVMLYADRTGVELTDIRANPASGYTLFRISSTADCRSGERLVLSRYLRE
THSFHHLITTQYSAYIMDERFPCVPMLKWDHMMQSPPVFCHVIPGSSSSGLATGGRESTT
KVLLGSQSSQEITMLQYSGGRAQACFSRGPPQALLRPRDSLKHLPVQIPRRLRNANNRLS
SPAAGIACIQKKAVRGGQECMCILQLTEAGDIFYQILEPEQQDAEMSRPPAARDEPVLQQ
AAKELPQSTLTEEATPGRKLEDLPPGSQPLFSDTSSDEGIVRPTQSLSMHRVVAKKTERD
QRAMNVYSDSDCESSEASKNRKQLQLPVIVNDEPELDEMSSLDEGVKDDNVAKGKSDNLG
KEEVTVSPSQRPIPIKVSSSALVMWKHWLQKLMQKCNEKKPRPHCSLHPTIETKGLFHLP
DNDASDVSEEECVQSLRQVLRSCMSRRSLLVHSTVSASLRTPDIVPLTNQVDTEAWTDPL
SQRLTLSWKSEEAWRAWWTEHLGMNREAKVQALRKKRRKEKEAKRAAGSVLDLSGSFTSS
VSYQTDLDDFSDSTGWSSATSQGAWSDAENKETQSQLDFWEHERERALTPSTIQMDTPDH
TPATTPQVVQGEQGDRQTPSRPHSLSVNQPHSPNPPASQRRNKRPADDILSVLFAPQEVP
SHNDFPENESPVHPNTASTLFRSSQSQRSLRVDLSKEVFPSIGSSQTSSFSQSSQGRQGL
SQASQPKKKKSRMGF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacatggattaccagttcccacctcagctttttccttccttttacaactgcggg
ccgccgaactcgaacctgaaacactgtgccggaaactggggctcctacaacggagtgagg
cttgagagtgtctccgggcttccctccagctggacatttacatccaagcatcaggttaga
ggggagacgtggcgcgtcaccgagcctgtcccgcttcccctcctatctcctaaaaaggcc
ttcctttggcccccgaaacctccagatgtgcaggacttcacagaacacatggagaacttc
ttcgtggatcactctcaagatgcattcagttgcatgagtgatgtcctgggtgaaaacttc
aacttcaaaccaggaaagaaagagaaatatcgcagcgaatccgtcagcatgtggagagtg
aaatccttcctcgacagactaaagcttaaattatgtctgaagtcatataactgtcctgcc
atgaatgggtacagcagcttgctgtccgacgtggtgcacgacatccctcccgacttgctg
gggtctctgctgcaagaggagctgagggagcaaaggaagcgcctggtgttctctgacaga
gccacagggggcgcattggcattcgtccccttctcacacaatgatagcagcgactctctg
catggctgccttctctatcccagaaaacaaggactagactgcctcaccttccacaaagtg
gagctgcagcaccacaaagggggtacttcctgtgtggacaccagcagccacgaccctctc
agtttccagctcacagcccccatcagacagatcagcttcacgtccctcttcaacgaaggc
tgcgttggtgtgcggtcagattacctttgtggagtctggaggttcagtgaaagcaacgag
ccacgtttactccaggcggtcaacaccagagagatggcaacctgcatcagtgtcagtcct
catattttgggagaagttctcgtggcgagtgagagtggagccgcaaacctgtggactgtc
ggcaaagggatgcagaaggttcgtgtggaggacagcaacttgtacttcaacgccaagtca
tcctggagatggtgcgaattctctgctcacccaagggtgatgctctacgcagacaggaca
ggggtggagctcacagatatcagggcaaatccagcctcaggatatacactgtttcgtatc
agcagcaccgcagattgtcggagcggggagagactcgtcttgtcccgatatctgagagaa
actcactctttccatcacctcatcaccacacagtactctgcctacatcatggacgagcgt
tttccatgcgtgccaatgctcaagtgggatcacatgatgcagtccccacctgtgttttgt
cacgtcattcctggctcctcatcctctggcttggcgacaggaggcagggaaagtaccact
aaggtcctgcttggctcccagagttctcaggaaatcacaatgctgcagtactcaggaggc
agagcacaggcctgtttcagtcgaggtcctcctcaggctctgctcagacccagagacagc
ctgaaacacctcccagtccagatccctcgccgcctgcgcaatgcaaacaatagactgtct
tcaccggccgcaggcattgcttgtattcagaagaaagcagtacgaggtggtcaggagtgt
atgtgcatcctacagcttacagaggcaggagatattttctatcagatacttgagcccgag
cagcaggacgccgagatgtcccgaccaccagcggcgagggacgaacctgtgctgcaacaa
gctgccaaggaactgccacagtcaactctgacagaggaagcaacaccagggaggaagctg
gaagaccttccaccaggttctcagcctcttttttcagacacgtccagtgatgagggcata
gtcaggcctactcagagtctcagtatgcacagagttgttgcgaaaaaaacagaaagagat
caacgagcaatgaacgtgtactctgactctgactgtgagtcttcagaggcaagcaaaaac
cgaaagcagttgcagctgccggttattgttaatgacgagccagagctagatgaaatgagc
agtttggatgaaggtgtgaaagatgataatgtggctaaaggtaaatctgataatcttggc
aaagaggaggtgaccgtcagcccatctcagcgaccgattccaataaaagtcagcagcagt
gctcttgtcatgtggaaacactggctccagaaactaatgcagaaatgtaatgaaaaaaag
cctcgtccacactgctcactgcaccccacaatcgaaacaaaaggtctgttccatctgcct
gacaatgatgccagtgatgtgtcagaagaagagtgtgtgcaaagcctgaggcaagtcctg
aggtcatgcatgtctagacgctcgctgctggttcacagcactgtgtctgcctcactcaga
actccagatattgtgccattgacaaaccaggtggacacagaagcctggactgatccactg
agtcagcgtctgaccctctcctggaagagtgaggaggcgtggcgggcgtggtggactgaa
catttagggatgaacagggaggctaaggtacaggctctgaggaagaagaggaggaaggaa
aaggaagcaaagagagctgctggcagtgtattggatctgtccggaagctttacctcatct
gtcagctaccagacagacctggatgatttctctgattcaacgggctggtcctctgcaaca
agtcagggggcatggtcagacgccgaaaataaggagacacagtcacagttggatttttgg
gagcacgagagggaaagagctctgacaccttccactattcaaatggacactccggatcac
acaccagccaccacacctcaagttgttcaaggtgaacaaggtgacagacagactcccagc
agaccacatagtctgtctgtaaaccaaccacacagccccaacccaccagccagtcagagg
aggaacaaacgtccagctgatgacatcctcagtgttttgtttgcacctcaggaggtccca
tcacataatgacttcccggagaatgaaagccctgtgcacccaaatacagcctccactctg
ttccgcagctcccagtcccagaggagcttgagggtggatctgtccaaggaagtcttcccc
tcaattggttcatctcagacttcatccttctcacagagttcacagggccgccaggggctg
tcgcaggcatcacaaccaaagaagaagaaatctcgaatggggttttaa
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