Mugil cephalus (flathead mullet): 125006705
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Entry
125006705 CDS
T08342
Symbol
pan2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125006705 (pan2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125006705 (pan2)
Enzymes [BR:
mcep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
125006705 (pan2)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125006705 (pan2)
mRNA degradation factors
3'-5' decay
Pan complex
125006705 (pan2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_CDC20-Fz
WD40_like
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
125006705
NCBI-ProteinID:
XP_047438951
LinkDB
All DBs
Position
1:8222090..8231932
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AA seq
1210 aa
AA seq
DB search
MMNFDGLDAGMGDYSPSLHGTLDAGLEPSMDPHLNPTLLQGVELDPEALAVTVPESVHLM
EGMFSELHSAVSEVGIPVTATHFDLQEEMLWMGNHRGHATSFFGPTMGRHSSFQVHATDD
IRHIQSLETGVLFLSKCNLRCHTRGGLVMFDYPMEDAADMHSLLMTDNNTLLMGGLQNYV
IEVDLNTVQETQKFTVEVPGVAIMRQSSRFFFCGHTSGKVTLRDLRTFKMEHEFDAFSGS
LSDFDVHGNLLAACGFSSRGLNGLACDRFLMVYDLRMMRAVTPLQVHVDPLFLRFIPTYT
SRLAIISQTGQCQFCEPTGLANVADIFHVNTVGQLLMSFDVSSSKQALAFGDSGGCVHLW
SDAPEVSFNDYSRETEFALPCLVDTLPQLDWNHDLLPLSLIPMPLTSTEPLLSDWPTALA
TPSPRRAPPVDPEILRTMKTVGFIGYAANPRTRPRNQVPYKIKDVELDYDNYNQVPESPI
GRDEEPHLYMVPKKYRKVTIKYSKLGLEDFDFKHYNRTLFAGLEPHIPNAYCNCMIQVLY
FLEPIRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGLI
LADSDEQTGKARLGRLIQSWNRFILTQLHQETQEQEGPQAYRGASSSSLGSSGESIIGKL
FGCEVENSSLCRCGKETVRSSLTLLFTMHYPEQNSQEKTVKEYDFCDILKRSICLEQSTQ
AWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSAKEAEFWKVQAEYAFNKAKQKEAMEPA
KPKEPPPMPTEWCLDGEDICSMEGFTFNTRAEDLRHVWIPLTLKMSISKGQGLEISSWPE
GEELSAAEEAEGASLYDLVVTVPHILDARTGGNLVAHIKVGETYHQRKEGVTHQQWYLFN
DFLIEPIDKAEAAQFDVSWKVPAILYYAKRNYHSKYDLRIKNPIDASVLLTEASLARKQR
KSHATFIPLMVSEMPQAGDLVGLDAEFVTLNQEEAELRSDGTKSTIKPSQMSVARITCVR
GQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLID
TGVRFVGHGLQKDFRVINLLVLKDQVIDTVYLFHLPRKRMISLRFLAWYFLDLNIQGETH
DSIEDARTALQLYRKYLELSRGGGNDEVRKVLKGLYEKGRQLDWKVPDSDTGDGQGSPKS
AAVFPSVMGL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactttgacggtctcgacgccgggatgggggactactctcccagccttcacggg
actctggacgcggggctggagccctccatggacccccacctcaaccccaccttactgcag
ggtgtggagctcgaccccgaggcgctggctgtgacggtgcccgagtctgtgcacctgatg
gaggggatgttttctgagctacacagcgcagtctcagaagttggcatcccagtcacagca
acgcactttgatctccaggaggaaatgctttggatggggaaccacagaggtcacgccacc
tccttctttggaccaacaatgggccgccattcttccttccaagtgcatgcgacggatgac
attcgacatattcagagtctggaaacaggcgtgttgttcctgtctaagtgcaacctcaga
tgccacactcgcgggggccttgtcatgtttgattacccaatggaggatgcagctgatatg
cacagtcttctcatgactgacaacaacacgttgctcatgggtggattacagaactatgtg
attgaagttgacttgaatactgttcaagaaactcaaaaattcactgttgaggtacctgga
gtggctataatgcggcagtccagtcgattcttcttctgtggccacacctctgggaaggta
acccttcgggacttgcgcaccttcaagatggaacatgagtttgatgctttctctgggagt
ctgtcagacttcgatgttcatggaaacctcctggctgcctgtgggttctccagtagaggg
ctgaatgggttggcgtgcgaccgtttcctcatggtgtatgacctccgcatgatgcgagct
gttactccactgcaggtgcacgtggatcccctcttcctgcgcttcattcctacctacacg
tcacgcctggcgatcatctcacagacaggtcagtgtcagttctgtgagcccactggtctt
gccaatgtggcggacattttccacgtcaacacagtgggccagttgctcatgagttttgac
gtatcgtccagcaaacaagccctggcctttggggattcagggggatgcgtgcacctgtgg
tctgacgcaccagaagtgtcgttcaacgactactctagggaaacagagttcgccctgccc
tgccttgtggacacactgccccagctggactggaaccatgacctactgcccctttctctc
attcccatgccgctgacgagcaccgagcctctgctgtcagactggcccactgcactggct
acacccagccccagacgagctcctcctgtggatccagaaatcctgcgcactatgaaaact
gtcggcttcatcggttacgcagctaatcctcgtacccgcccccggaaccaggtgccatat
aaaattaaagatgtggagcttgattatgataattacaaccaggtccctgaatcaccaata
ggacgtgatgaagagccacatctctacatggtccccaaaaagtacagaaaggtcacaatt
aaatactctaaacttggactagaggattttgacttcaaacattacaacagaaccttattc
gctggcctggagccgcacattcccaatgcctactgtaactgcatgatccaggtgttatat
ttcctggagccaatccggtgtcttgtgcagaatcatctgtgccaaaaggagttctgtttg
gcctgtgagctcggcttcctcttccacatgttggacttgtcgcgaggagatccatgtcag
gcctctaacttcctccgagcctttcgtaccatccccgaagcttcagcactgggcctgatc
ctggcagactcagacgagcaaacgggaaaggccagactcggtcgcttaatccaaagctgg
aatcgtttcatcctcacccagctccaccaggagacgcaggagcaggagggtccacaggcc
taccgaggagccagcagcagttctctgggctcctctggtgagtccataatcggaaagctg
tttggttgtgaagttgagaacagcagtctctgtcgctgtggcaaggaaacggtgcgctca
tccctcacgttgctcttcaccatgcattaccctgaacagaactctcaagaaaaaactgtg
aaggagtatgacttttgtgatatcctgaagagaagcatctgtctggagcagagcactcag
gcatggtgtgaaaactgtgagaagtaccagcccacagtgcaaacgcgcaacattaggtgt
ctgccagacgttctggtcataaactgtgaggtgaacagtgctaaagaggccgaattctgg
aaagttcaggccgagtatgccttcaataaggccaaacagaaagaggcgatggaacctgca
aaacccaaagaacccccacccatgcccaccgagtggtgtttggatggggaggacatatgc
agtatggagggcttcacctttaacacccgggcagaggatctgcgacacgtctggatccct
ctcactcttaagatgtccatcagcaaaggccagggactggagatcagcagctggcctgag
ggagaggagttaagcgctgctgaagaggcagagggcgcttctctctatgacttggtggtc
acggtgccccacatcctggacgctcgcactggtggaaacctggtcgcacacatcaaagtg
ggtgagacctaccatcagagaaaagagggagtcacgcaccagcagtggtacctcttcaat
gatttcttaattgaacccattgacaaggctgaagctgcacagtttgacgtgagctggaag
gtgccagccatcctgtattacgccaagagaaactaccacagcaaatatgacctccgcatt
aaaaaccccatagatgccagcgtgctgctgacggaggcctcgctggctcggaagcagagg
aagagtcacgccaccttcatccccctcatggtcagtgagatgccgcaggctggagacctg
gtggggctcgacgctgagtttgtcactctcaatcaggaagaggcagagctgcgcagcgac
ggcaccaagtcgaccattaaaccaagtcagatgtcagtagccaggatcacctgtgtgagg
ggccaggggcccaacgagggggttcccttcatcgacgactacatctccacccaggagcag
gtggtcgactatttgacgcagtattctggtatcaaaccaggagacctggacgccaaaata
tcctcgaagcatttgaccaccctgaagtccacctacctcaagctgcgcttcctcatcgac
actggagttcgctttgtcggtcacggcttgcagaaggacttccgtgttattaatttgctg
gttctgaaagatcaagtcatcgacactgtctacctgtttcatctcccccgcaagaggatg
atttccctcagatttctggcctggtactttctagatctcaatatccagggggaaacccac
gacagcatagaggatgcacgcactgccctgcagttgtacaggaagtacctggagctgagc
cgtggaggtgggaacgacgaagtaaggaaggtcctgaagggactctacgaaaaaggccgg
cagctggactggaaagtcccggattcggacacaggagatggtcaaggtagcccaaaaagt
gctgctgtgtttccctctgtgatgggactgtga
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