Mugil cephalus (flathead mullet): 125009062
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Entry
125009062 CDS
T08342
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
mcep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125009062 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
125009062 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125009062 (lsm4)
03041 Spliceosome [BR:
mcep03041
]
125009062 (lsm4)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125009062 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
125009062 (lsm4)
Spliceosome [BR:
mcep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125009062 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125009062
NCBI-ProteinID:
XP_047442561
LinkDB
All DBs
Position
6:complement(16673354..16676545)
Genome browser
AA seq
146 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGGGRGLFGGRGRGMTG
PGRGQQQQQQQQDKKPGKPQGMKNQH
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctgtccctgctaaagactgcccagaaccatcctatgctggtggagctgaag
aatggagagacgtacaacggtcacctggtcagctgtgacaactggatgaacatcaacctg
agagaagtcatctgcacctccagggatggcgataagttctggaggatgcccgagtgctac
atccgaggaagcaccatcaagtacctgcgaatccctgatgaaatcatcgacatggtgaag
gaggaggtggtgtcgaagggccgcggacgtggaggcgcccagcagaacaagcagcagggc
aaaggcagaggaggaggtggccgaggtttgtttggtggccgtggccgagggatgacgggt
cccggtcggggccaacaacagcagcagcagcagcaggataagaaaccaggaaaaccacag
ggaatgaagaaccagcactga
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