Mugil cephalus (flathead mullet): 125014438
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Entry
125014438 CDS
T08342
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125014438 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125014438 (cnot1)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125014438 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125014438 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
125014438
NCBI-ProteinID:
XP_047451435
LinkDB
All DBs
Position
10:complement(6517283..6538926)
Genome browser
AA seq
2395 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAVDNPLHYQKSLKPSAHLFTQLSKVLK
LNKVQEVIFGLALLNSSNADLCGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHRLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILVDRIL
PDSGELTKTIMETTLAELMQEVGYGFCASLDECRNVIVQYGATASQVAKVLGMMARTHSG
LSDPMQIQSISAPGTGMWSDGKDKNDGSQAHTWNVEVLIDLFKEVNPNLNFKEVTYELDH
PGFIIRDSKGLHIVVYGILRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMNPEVFCFAD
YPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHCPDM
LVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHSMA
EWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD
KIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAGSVS
QELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQVDPLTGMGSLNLG
GTAPSHTPSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLASQLPGMDSGP
LGSGIGSGIGSSLGMPSVNTDPFGTRKMSTPGLNPPTFQQSKMKASDLSQVWPEANQHFS
KEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRF
FPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRF
KNRLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALA
QVQAQTQSQQPAGLKAPQPGQPSTLVTTTTTATTATKTSTIARPTPSSFKKDVPPSINTT
NIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQY
LVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLK
NLGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFR
PQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKLKTLE
EQLSAPKKETKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVY
ALAGLVPHININVNIPLLQTHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIR
KDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQR
EMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVV
LTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWA
TDDVAQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQK
AVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYN
VEAVELLIRNNLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADL
FHTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDD
PPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTE
MCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLN
KVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFH
ILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVEL
NKPMQILYKAVKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR
LPDPFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQ
VSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTE
GRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWG
LLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactacagagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaagactttcaccagacacagtttctgattcaggagtgtgtgtcg
ctgatatcgaagccaaactttatctctactctgtgttacgccgttgacaatcccctgcac
taccagaagagtttgaagccatcagcccacctattcactcaactgagtaaagttctgaag
ctcaacaaggtccaagaggtgatatttggccttgctttgctcaactcaagcaacgcagac
ctttgtggttttgctgcgcagttcatcaagcagaaacttccagacctcctgcggtcatac
gttgacgcagatctcggaggaaaccaggaaggtggcttccaagacattgccatagaggta
ttacaccgactgctctcccatctattgtttggccagaagggagccagtggggtagggcaa
gaacagattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcgtggacaggatcctg
ccagactcgggggagttaactaagaccataatggagactactctcgcagaattaatgcaa
gaagttggctatggcttctgtgcaagtctggacgagtgcagaaacgtaatcgtgcagtat
ggggctacagccagccaggtggccaaagtcctgggcatgatggctcgtacccactctggt
ttatctgatcccatgcaaatacagtccatctctgctccagggactggtatgtggagtgat
ggtaaggataaaaacgatgggtcgcaggcacacacgtggaatgttgaagtcctcatcgac
ctcttcaaagaagtgaatcccaacctgaacttcaaagaggttacatacgaacttgaccac
ccaggatttataatccgggacagtaaaggtctgcacatcgtggtgtatggtatcctgagg
gggctgggcatggaggtcttccctgtcgatctcatctataggccttggaaacacgccgaa
ggacagctgtcatttatccaacactccctgatgaacccagaggtgttctgctttgccgac
tacccatgtcacactgtggccattgacatcctcaaggctccaccagaggatgacaaccgg
gagattgccacatggaaaagcctggacctggtggagagtctgctgaggctgtctgaggtg
ggccagtatgagcaggtgaagcaactctttagcttcccgatcaagcactgcccagacatg
ttggtcctggcattactgcagatctccacgtcctggcacacgctgcgccatgagctcatc
tctaccctaatgcccatttttctgggcaaccaccccaactctgccatcatcctgcactat
gcctggcatggacagggacagtctccttccattcgccagctaattatgcattctatggct
gagtggtacatgagaggggagcagtacgaccaggccaagctatctcgcatcctggatgtg
gcccaggatttaaagtctctatcgatgctgctgaatggtactccatttgcctttgttatt
gatcttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatggctgactgac
aaaatcagagaacatggggaacctttcatccaggcatgtgtgacattcctgaagaggcgc
tgcccatccatcatggggggcctggcccctgacaaggaccagcccaaaagtgcccagctg
cccccagagactttggccaccatgttggcttgcttgcagtcctgtgctgggagtgtgtcc
caggagttgtcggagactatcttgaccatggttgcaaactgcagcaatgtaatgaacaaa
gcccggcagccaccaccaggggtaatgccaaagggacgtgccccaagcaccagcagcctg
gatgccatctcacctgtgcaggtcgatcctctcactggcatgggttctctaaacctgggt
ggtacagcaccctcacatactccgagcatgcagggcttcccaacctcactgagttcagct
ttcagtaatccccagtccccagcaaaggcctttccgccactctctaaccctaatcccagc
acaccatttgggggcattggcagcctcgcctcacagctccctggtatggactctggtccc
ttgggctctggcattggttctggcataggctctagtttggggatgccatcagtaaacact
gacccttttggcaccaggaagatgagcaccccaggcctgaacccgcctacctttcagcag
agtaagatgaaggcctctgacctttctcaggtgtggcccgaggcaaaccagcactttagc
aaggagatagatgacgaggcaaacagttacttccagcgcatctacaaccacccacctcac
ccaactatgtctgtcgatgaagtactggagatgttgcaaaggttcaaggattccaccatc
aagcgagaacgagaggtgttcaattgtatgctgcggaacttgtttgaagaatacagattc
ttcccccaatacccagacaaggagctgcacatcactgcttgcctttttggtggcattatc
gagaagggtcttgtcacctacatggccctgggtttggccctccgatatgttcttgaagcc
ttaagaaaaccatttggatccaaaatgtattactttggaattgctgccctagataggttc
aaaaacagacttaaggactatcctcaatattgtcaacatctggcttcaatcgctcacttc
ttgcaattcccccatcatttacaagagtgcgtgcagtatatcgagtatggccaacagtca
cgggaccctccggtgaagatgcagggttccatcaccacacctggaagtttggcgctggca
caagttcaagcccagacccagtcgcagcagccagccggcctcaaggccccacagccgggc
cagccgagcacccttgtcaccaccaccaccacggcaaccacggcaaccaagacgagcacc
atcgcaagaccgacacccagcagcttcaagaaggatgtgcctccctccataaacactacc
aacatcgacaccctgctagtggccaccgaccaaacggaaaggattgtagagccacctgaa
aatgtccaggagaagattgcttttatctttaacaacctttctcagtccaacatgacgcag
aaggtcgaggaattgaaagagacggtgaaagaagagtttatgccttgggtatctcagtac
ctggtgatgaagcgtgtcagcattgaacccaacttccacagtctctactccaactttctg
gacacactcaagaacccagagtttgtcaagatggttctcaatgaaacataccgaaatatc
aaggtacttttgacctcagacaaggcagctgccaatttctcagatcgctccctgctgaag
aacctgggccactggttgggcatgattacactggccaaaaacaagcctatcctctacaca
gatctagaagtcaagtctctgctgctggaagcctacgtgaaaggccagcaggagctgctt
tatgtggttccttttgtggccaaggttttggaatctagtctacgtagtatggttttcagg
ccccagaatccctggactatggccatcatgaatgtgctcgctgagttgcatcaggaacat
gacctcaagttgaatttgaagtttgagattgaagttctttgtaagaacttgtctctggac
atcaacgacctgaagccaggaaatctgctgaaagacaaagaaaagctgaagactctagag
gaacagctgtctgcgccaaagaaagagacaaagcctccagaagagatgctgccagtttct
acaacaggtgactttgttccatttgcagctcctccctcaactccagctgccaccaccacc
acttgcacaaccactgggcccccaactccacagttcagttaccatgacatcaatgtgtac
gccttggcaggcctggttccacacatcaacataaatgtcaacatccctctgctacagact
catcctcagctgaaacagtgtgtgcggcaatcagtggagcgagcagtccaggagcttgtg
cacccggtggtagatcgctctatcaaaattgcaatgacaacctgtgagcagatcatcagg
aaggacttcgccctggattcggaggaatcccgcatgcgcgtggctgcccaccatatgatg
aggaacttgactgctggcatggccatgatcacctgccgcgagcccctgctcatgagcatt
gccaccaaccttaagaacagctttgctgcagcacttagggcaccaactccccaacagagg
gaaatgatggaagaagccgcagccaggattgctcaagataactgtgaattggcttgctgc
ttcattcagaaaactgccgtggagaaggctggccctgaaatggataagagactagccacg
gagtttgagctgaggaagcatgcacgccaagagggacgtcgctattgtgatccagttgtg
ctgacttaccaggctgaacgtatgcctgagcagatcaggcttaaggtgggaggagtggac
cctaagcagctggctgtatatgaggagtttgccaggaatgttccaggtttcttgccaagc
aatgatctctcccagcccactggcttcttggctcagcccatgaagcaacaggcatgggcc
acagatgacgtggctcagatctatgataagtgcatggcagacttggagcagcatcttcat
gctatccctccagccctcgctatgaatcccctgacccaggccctgcgtagcctcctggaa
gctgtggctttggctagaaactcgagggatggcattgctgcactcggcctcctgcagaag
gctgtggagggtcttctggatgctaccagtggagctgatgctgacttgctgcttcggtac
agggagtgccacctgctggtgcttaaagcccttcaggatggacgtgcctatggaccacag
tggtgcaataagcagattaccaggtgtctgatcgaatgccgtgatgaatataaatacaac
gtggaggcagtggagcttctgatcaggaacaatctcgtgaatatgcagcagtatgacctg
cacctggcacagtccatggaaaatggattgcactacatggcagttgcatttgccatgcag
ctggtgaagctgctgctggtagatgaacgcagtgtgagccatgtcacagaagctgacctc
ttccacacaattgagactttaatgagaacctgtgcacactccagagccaacgcacctgag
gggcttccccagctgatggatgttgtacgctccaactatgaagccatgattgaccgggcc
cacggtggacctaacttcatgatgcactctgggatttcccaggcttcagaatatgatgat
cctccaggcctgagggagaaggcagagtacctcctgagggaatgggtcaacttgtatcac
tcagctgctgctggcagggatagcacaaaggctttctctgcctttgttggccagatgcac
cagcagggcatcctgaagacggatgacctgatcactcggttcttccggctatgcacagaa
atgtgtgtggagataagctatcgggcacaggctgaacaacagcacaacccagcagccagt
gcggccatcatcagagccaagtgctaccacaacctggatgcctttgtcaggctcatagca
ctgctggtcaaacactctggagaggccaccaacacagtgacaaagatcaacctcctcaac
aaggtgctgggtatcgtagttggagtgttaatccaggaccatgatgtccgtcagactgaa
ttccaacagctgccataccaccgcattttcatcatgctgctgttggagctcaatgctccc
gaacacgtcctcgagaccattaacttccagacactcactgccttctgcaatacctttcac
attctgagacccaccaaggcgcctggctttgtgtacgcttggctggagctcatctcccat
cgcatcttcattgccaggatgctcgcacacacaccacagcagaagggttggcccatgtat
gcacagctgctgattgatctcttcaagtacttggccccgttcctgaggaatgtagagctc
aacaaacctatgcaaattctctacaaggctgttaagggcacactgcgagtgctgctggtc
ctgctgcacgacttcccagagttcctgtgtgattaccattatggcttctgtgatgttatc
ccacccaactgcatccagctccgcaacctcatcctcagtgcctttccacgcaacatgagg
ctccccgaccctttcacgcccaatctgaaggtggacatgctgagtgagatcaacattgct
ccccggatcctcaccaacttcacaggcgtcatgccttcgcagttcaagaaggatctggat
tcatatctgaagacacgctcacctgtcactttcctgtctgagctgcgcagtaacctgcag
gtgtctaatgaaccaggaaaccgctacaacatccagttgatcaatgctctggtgttgtat
gtaggcacacaggcaattgctcacatccacaacaagggcagcaccccctctatgagcacc
atcacacactctgcacacatggacattttccagaacctggctgtggacctggacactgag
gggcgttacctgttcttgaatgcaattgccaatcagctccgctaccccaacagccacact
cactacttcagctgcaccatgctgtatctgtttgctgaggccaacaccgaggccatccag
gagcagatcaccagggttctgctggagaggctgatagtgaacaggcctcacccgtggggt
ctcctcatcaccttcatcgagctgatcaagaaccctgccttcaagttctggagccacgac
tttgtgcactgtgcccctgagattgaaaagctgttccagtcagtagctcagtgctgcatg
gggcagaaacaggcccagcaggtgatggagggcaccggtgccagctag
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integrated database retrieval system
