Mugil cephalus (flathead mullet): 125020069
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Entry
125020069 CDS
T08342
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04510
Focal adhesion
mcep04512
ECM-receptor interaction
mcep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125020069 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125020069 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125020069 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcep00535
]
125020069 (col9a2)
Proteoglycans [BR:
mcep00535
]
Extracellular matrix (ECM) proteoglycans
Others
125020069 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125020069
NCBI-ProteinID:
XP_047461277
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All DBs
Position
14:8189018..8205318
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AA seq
691 aa
AA seq
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MAALSALLKTWVILQTLCLALAQVRGPPGPQGQPGPPGPSGTPGSDGIDGDKGPPGPPGP
PGQKGEPGEPGPDGPPGENGIDGLIGAKGDRGPIGNPGQKGQPGSSGEPGPPGSGLPGLS
GIPGPIGLPGEIGPTGPKGILGPPGPPGLPGPPGKPGPPGKFIGGEEGSADLECPLNCPA
GPKGPQGLQGVKGHKGRAGILGEPGSIGKPGPKGEIGISGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPRGYKGINGPVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGRPGPPGPQGTAGLPGSPGAKGGPGDKGEPGPRGHT
GSSGAPGPLGEPGIPGEPGMEGVPGPKGDRGQRGEVGPQGIVGKPGNKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGSKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDSGYNGPT
GDPGKPGDPGPPGLPGPRGLNGERGVPGMPGIGGSPGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGTGVMGPPGPPGPPGSPGPQGQHGLPGARGIPGIIGAPGQIGNTGLKGKR
GAKGERGDPGKPHSGPPGPPGIQGPPGVDGVARDGRPGERGPQGSAGEAGRPGKPGPTGL
PGYCEAAMCLAASAYTSPRLQEAGTIKGPNI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggttatactgcagaccctgtgcctggct
ctggcccaagtgaggggcccacctggacctcagggccagccaggcccaccaggcccctct
ggtactcctgggtccgatggcattgatggagacaaaggaccccctgggccgcctggacca
ccagggcaaaagggagagccaggagagccaggtcccgatggacccccaggggagaatggt
attgatggtttgatcggagcgaagggcgaccgcggccccatagggaaccctggccagaag
ggtcaaccaggttcgagtggtgagcctggacctcctggatccggccttccaggtctgtct
ggtattccaggaccaattggtctgccgggtgaaattggacccactggaccgaagggtatt
ttgggaccacctggaccaccaggacttcctggacctcctggcaaaccaggtcctcctggc
aagttcatcggtggagaggagggcagcgcagacttagagtgtcctcttaactgcccagca
ggacctaagggtccccagggactgcagggagtcaagggacacaaaggacgtgccggtatt
ctcggagagcccggcagcataggaaagccgggtcccaagggagaaataggcatctcgggg
gaacagggcatcccaggacctccgggtccaatgggtctgcgagggtatccaggaatgatg
gggcctaaaggagaggcaggccctcgtggttacaagggcatcaacggacctgtaggaatt
cctgggcctcctggtgaggagggacctcaaggaccacccggagaagcgggagacaaagga
gacaagggtagccgaggtatccagggcccgcagggtgcggttggcaaaaaaggagagaat
ggtctgccgggtatagacggaaaagacggcacacctggtattcctggaatcaaggggggc
cccgggcaggctggaagacctggtcctcctggtcctcagggaacggcgggattacccggc
agcccaggggcaaagggggggcctggagataagggtgaacctggaccaaggggtcacact
ggctcgtctggtgcacccggacctctgggtgagcctggtattcctggtgagcccggtatg
gaaggagtccccggacccaagggcgacagaggacagcggggagaggttgggccacaagga
atagtcggcaagcctggaaacaaaggagaaagagggcctattggtgtcccaggtgcccag
ggtctcagtgggacgaagggagacaagggcttccagggaaaagtgggttcaaagggggac
atcggtgaccccggtgttgaaggattggctggcgagaaaggtgaaaagggtttgtctggt
gagcctgggcccaaaggacagcaaggaattaggggagactctgggtacaatggacccact
ggagaccctggtaaaccaggagacccgggaccacctgggctgcccggcccaaggggactt
aacggagaacgaggagtgcccggcatgcctggcattgggggatcaccgggacgggatgcg
tctgaccagcatattattgaagtggtgctgaagatgttgcaggagaggctagctgcggtg
gcagtgagcgccaagagagctgtgcttggtggtacaggtgtaatgggtcctcccggaccc
cctgggcctccagggtcacctgggcctcagggccagcatggcttacctggtgcccgtggc
atccctggtattattggagcacctgggcagattggaaacacaggccttaaaggaaagaga
ggggcaaagggagagagaggagatccaggaaaacctcactcgggaccaccaggaccccca
ggaatccaaggtcctcctggcgtagatggcgtggctcgggacggtaggcccggcgagagg
ggacctcagggatcagctggagaggctggtcgccccgggaaaccaggcccaacagggctc
ccgggttactgcgaagcagccatgtgcctggccgcgtcggcgtacacctccccgagacta
caggaggcgggaacgatcaaaggacccaacatttag
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