KEGG   Macaca fascicularis (crab-eating macaque): 102138836
Entry
102138836         CDS       T02918                                 
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
  KO
K06238  collagen type VI alpha
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf04151  PI3K-Akt signaling pathway
mcf04510  Focal adhesion
mcf04512  ECM-receptor interaction
mcf04518  Integrin signaling
mcf04820  Cytoskeleton in muscle cells
mcf04974  Protein digestion and absorption
mcf05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102138836 (COL6A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102138836 (COL6A1)
   04518 Integrin signaling
    102138836 (COL6A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102138836 (COL6A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102138836 (COL6A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102138836 (COL6A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102138836 (COL6A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcf04147]
    102138836 (COL6A1)
   00536 Glycosaminoglycan binding proteins [BR:mcf00536]
    102138836 (COL6A1)
Exosome [BR:mcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102138836 (COL6A1)
Glycosaminoglycan binding proteins [BR:mcf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102138836 (COL6A1)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   102138836 (COL6A1)
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3
Other DBs
NCBI-GeneID: 102138836
NCBI-ProteinID: XP_005548555
Ensembl: ENSMFAG00000003504
LinkDB
Position
3:complement(join(1108044..1108666,1108893..1108922,1109196..1109379,1109505..1109688,1109837..1109946,1110464..1110597,1111098..1111106,1111479..1111515,1112173..1112208,1112661..1112726,1112921..1112983,1113463..1113498,1113723..1113773,1114108..1114170,1114389..1114451,1117509..1117571,1118882..1118944,1119306..1119341,1119487..1119540,1119631..1119693,1120645..1120707,1120859..1120912,1121954..1121998,1122092..1122118,1122841..1122867,1122966..1123010,1123479..1123532,1124216..1124260,1124351..1124371,1124723..1124743,1124826..1124954,1125205..1125364,1127460..1127660,1129049..1129178,1129872..1129968))
AA seq 1028 aa
MRAARALLPLLLQACWTAGQDEPETPRAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDDVEIIQGLTRMPGDRDTLKSRVDAI
KYFGKGTYTDCAIKKGLEQLLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGVKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTIVDMIK
NNVEQVCCSFECQPARGPPGLRGDPGFEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGP
KGDPGAFGLKGEKGEPGADGEAGRPGSSGPPGDEGEPGEPGPPGEKGEAGDEGNPGPDGA
PGERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGSEGARGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGNRGPPGINGTK
GYPGLKGDEGEAGDPGDDNNDIAPRGVKGAKGYRGPEGPQGPPGHPGPPGPDECEILDII
MKMCSCCECKCGPIDLLFVLDSSESIGLQNFEIAKDFVVKVIDRLSRDELVKFEPGQSYA
GVVQYSHSQMQEHVSLRSPSIRNVQELKEAIKNLQWMAGGTFTGEALQYTRDQLLPPSPN
NRIALVITDGRSDTQRDTTPLNVLCSPGVQVVSVGIKDVFDFVPGSDQLNVISCQGLAPS
QGRAGLSLVKENYAELLEDAFLKNVTAQICIDKKCPDYTCPITFSSPADITILLDSSASV
GSHNFDTTKRFAKRLAERFLMAGRTDPAHDVRVAVVQYSGTGQQRPERASLQFLQNYTAL
ASAVDAMDFINDATDVNDALGYVTRFYREASSGAAKKRLLLFSDGNSQGATPAAIEKAVQ
EAQRAGIEIFVVVMGRQVNEPHIRVLVTGKTAEYDVAYGERHLFRVPSYQALLRGVFHQT
VSRKVALG
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgagggcagcccgcgctctgctgcccctgctgttgcaggcctgctggacggccgggcag
gatgagccggagacccccagggcggtggccttccaggactgccccgtggacctgttcttt
gtgctggacacctcggagagtgtggccctgaggctgaagccctacggggccctcgtggac
aaggtcaagtccttcaccaagcgtttcatcgacaacctgagggacaggtactaccgctgt
gaccgaaacctggtgtggaacgcgggtgcactgcactacagcgacgacgtggagatcatc
caaggcctcacgcgcatgcccggtgaccgcgacacgctcaaaagcagagtggacgccatc
aagtattttgggaagggcacctacactgactgtgccatcaagaaggggctggagcagctc
ctcgtggggggctcccacctaaaggagaacaagtacctgattgtggtgaccgacgggcac
cccctggagggctacaaggagccatgcggggggctggaggacgcagtgaacgaggccaag
cacctgggcgtcaaagtcttctcagtggccatcacgcccgaccacctggagccgcgtctg
agcatcatcgccacggaccacacgtaccggcgcaacttcacggcggctgactggggccag
agccgcgacgcggaggaggtcatcagccagaccatcgacaccatcgtggacatgatcaaa
aataacgtggagcaagtgtgctgctccttcgaatgccagcctgcaagaggacctccgggg
ctccggggcgaccctggcttcgagggagaacgaggcaagccagggctcccgggagagaag
ggagaagccggagatcctggaagacccggggacctcggacctgttgggtaccaggggatg
aagggagaaaaagggagccgtggggagaagggctccaggggacccaagggctacaaggga
gagaagggcaagcgtggcatcgacggggtggacggcgtgaagggggagatggggtaccca
ggcctgccaggctgcaagggctcgcccgggtttgacggtattcaaggaccccccggaccc
aagggagaccccggcgcctttggactgaaaggagaaaagggtgagcctggagctgacggg
gaggcggggagaccagggagctcgggaccacctggagacgagggcgagccaggagagcct
ggtcctcccggagagaaaggagaggcgggtgacgaggggaacccaggacctgacggtgcc
cccggggagcggggcggccctggagagagaggaccacgggggaccccaggcacgcgggga
ccaagaggagaccctggtgaagctggcccacaaggtgatcagggaagagaaggccccgtt
ggtgtccctggagacccgggcgaggctggccctatcggacctaaaggctaccgaggcgat
gagggtcccccaggctccgagggtgccagaggagccccaggacctgctggaccccctgga
gaccctgggctgatgggtgagaggggtgaagacggcccccctggaaatggcaccgagggc
ttccctggcttccccgggtatccgggcaacaggggccctcccgggataaacggcacgaag
ggctaccccggcctcaagggggacgagggggaagccggggaccccggagatgacaacaac
gacattgcaccccgaggagtcaaaggagcaaaggggtaccggggccccgagggaccccag
ggacccccaggacacccaggaccgcccgggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgaatgcaagtgcggccccatcgacctgctcttcgtactg
gacagctcagagagcatcggcctgcagaacttcgagattgccaaggacttcgtcgtcaag
gtcatcgaccggttgagccgggacgagctggtcaagtttgagccgggacagtcgtacgca
ggtgtggtgcagtacagccacagccagatgcaggagcacgtgagcctgcgcagccccagc
atccggaacgtgcaggagctcaaggaagccatcaagaacctgcagtggatggcgggcggc
actttcacaggagaggccctgcagtacacgcgggaccagctgctgccacccagcccgaac
aaccgcatcgctctagtcatcactgacgggcgctcagacacccagagggacaccacgccg
ctcaacgtgctctgcagtccaggcgtccaggtggtctccgtgggcatcaaggacgtgttt
gacttcgtcccgggctccgaccagctcaatgtcatttcttgccaaggcctggcaccatcc
cagggccgggccggcctctcgctggtcaaggagaactatgcagagctgctggaggacgcc
ttcctgaagaatgtcaccgcccagatctgcatagataagaagtgtccagattacacctgc
cccatcacgttctcctcccccgctgacatcaccatcctgctggacagctctgccagcgtg
ggcagccacaactttgacaccaccaagcgcttcgccaagcgcctggccgagcgcttcctc
atggcgggcaggacggaccccgcccacgacgtgcgggtggctgtggtgcagtacagtggc
acaggccagcagcggccagagcgggcgtcgctgcagttcctgcagaactacacggccctg
gccagtgctgtcgatgccatggactttatcaacgacgccacggacgtcaacgacgccctg
ggctatgtgacccgcttctaccgcgaggcctcgtctggcgctgcaaagaagaggctgctg
ctcttctcagatggcaactcacagggcgccacgcccgcggccatcgagaaggccgtgcag
gaggcccagcgagcgggcatcgagatcttcgtggtggtcatgggccgccaggtgaatgag
ccccacatccgcgtcctggtcaccggcaagacggccgagtacgacgtggcctacggcgag
cgccacctgttccgtgtccccagttaccaggccctgctgcgcggtgtcttccaccagacc
gtctccaggaaggtggcactgggctag

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