Entry |
|
Name |
(GenBank) ABC transporter related
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
mch Methylorubrum extorquens CM4
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mch00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mchl_0151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mch03400]
Mchl_0151
DNA repair and recombination proteins [BR:mch03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mchl_0151
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mchl_0151
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
146481..149177
|
AA seq |
898 aa
MDQAKPKERVRIARAGAGRPGYVTVKGAREHNLRDVDVEVPRDALVVFTGVSGSGKSSLA
FGTLYAEAQRRYFESVAPYARRMIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSV
TTLSSLVRMMYSRAGTYPPGQPMLYAEDFSPNTPQGACPSCGGLGRVYQATEASMVPDPS
LTIRERAVAAWPQAWGGQNLRDILVSRGVDVDTPWKDLPRTLRDWILFTDDQPQEPVYAG
LSPEQTRLARRRRLEPSYMGTFTSARRHVLGTFTNSQSALMRRRAASYLVSEDCPVCQGK
RLKPEALSVTFAGLDIGELSRMPLADLAEAMRPAAEDRLPDAADGTAPDTLDRDTGLRDR
AKRAASGGSAHAGAPDVRATPNLSIEKRLAAQRLAADLVDRIGTLTELGLGYLSLDRVTT
TLSSGELQRLRLATQLRSQLFGVAYVLDEPTAGLHPADGDAMHDALAGLLASGNSLFVVE
HDIGTMRRADWLVDVGPAAGEHGGTVLYSGPPEGLREVEASRTRLHLFGMAEPPQRPRRE
PSGWLRLEGIVRNNLRGVSAAFPLGCLTAVTGISGSGKSSLVSQALLELVGDRLGRPVEI
DDEPEDPLDDAPGPTEGRIVGGMDGIRRLVKVDQKPIGRTPRSNLATYTGLFDAVRKLFA
ATPEARKRRYDAGRFSFNVAKGRCPACEGEGFVSVELLFMPSVYAPCPTCHGTRYAPDTL
EVTWNGLTIADVLGLTVERACDAFADEPSVLRPLAVLRDLGLGYLRLGQPATELSGGEAQ
RIKLATELQRGQRGGTLYVLDEPTTGLHPTDVDRLMLQLNGLVDAGNAVVMVEHDMRVVA
GADHVIDVGPGAGNLGGTIVAAGRPEDVAGARGSRTAPYLRDELMAYAGQESSPRLAG |
NT seq |
2697 nt +upstreamnt +downstreamnt
atggatcaagccaagcccaaggaacgggtcaggatcgcccgggccggcgcgggacggccg
ggctacgtcacggtaaagggcgctcgggagcacaatctgcgcgacgtcgatgtggaggtg
ccgcgcgacgccctcgtggtgttcaccggcgtctcgggttcaggcaagtcctcgcttgcc
ttcggtacgctctacgcggaggcccaaaggcgctacttcgaatcggtcgcaccctacgcg
cgccggatgatcgatcaggtcggggtacccgacgtcgattccatcgagggcctgcccccg
gcggtcgccctccagcagcagcgcggaacgcccagcgcacgctcctcggtcggcagcgtc
accactctgtcgagcctggtgcggatgatgtattcgcgcgccggcacctatccgccgggc
cagccgatgctctacgcggaggacttctcgcccaacacgccccagggcgcctgcccctcc
tgcggcgggctcggacgggtctatcaggcgacggaggcgtcgatggtgcccgacccctcg
ctgacgatccgcgagcgcgccgtcgcggcctggccgcaagcctggggcgggcagaacctg
cgggacatcctggtgagccggggcgtcgatgtcgacacgccgtggaaggacctcccgagg
acgctgcgggactggatcctgttcacggacgaccagccgcaggagccggtctatgccggg
ctttccccggagcagacgcggctggcccgccggcgtcgcctggagccgagctacatgggc
acgttcacgagcgcccgccgccacgtgctcggcaccttcaccaactcgcaaagcgccctc
atgcgccggcgggcggcgagctacctcgtgagcgaggattgcccggtctgccaaggcaag
cgcctgaagcccgaggcgctctcggtcaccttcgcggggctggatatcggcgagctctcg
cgcatgccgctcgccgacctggccgaagcgatgcggccggccgccgaggaccgcctgccc
gatgcggccgacggcaccgcgccggacaccctcgaccgcgacacgggccttcgggatcgc
gccaagcgcgccgcgtccggtgggtcggcccatgcgggcgcgccggacgtgcgcgcgacg
ccgaacctctccatcgaaaagcggctggccgcccagcgtctcgcggccgacctcgtcgac
cggatcggaacgctgacggagctgggtctgggctacctgtcgctggaccgggtgaccacg
accctgtcgtcgggcgagctgcagcggctgcgcctcgccacccagctccgctcgcagctc
ttcggcgtagcctacgtgctcgacgagcctacggccgggctgcaccccgccgacggtgat
gccatgcacgacgcgctcgccgggctgctcgcctcgggcaattcgttgttcgtcgtcgag
cacgacatcggcacgatgcgccgcgccgactggctcgtcgatgtcggtccggccgcgggc
gagcacggcggcaccgtgctctatagcgggccgccggaaggcctgcgcgaggtggaggcg
tcgcgcacgcgcctccacctgttcggcatggccgagccgccgcagcgcccgcgacgggag
ccgtcgggatggctgcgcctggaaggcattgtccgcaacaacctgcgcggggtctccgcc
gcgttcccgctgggttgtctcaccgccgtgacgggcatttccggctccggcaagtcgagt
ctcgtgagccaagccctgctggagctcgtcggcgaccgcctcggacggcccgtcgagatc
gacgacgagccggaggatccgctcgacgacgcgccgggcccgacggaggggcgcatcgtc
ggcggcatggacgggatccggcgtctggtgaaggtcgatcagaagccgatcgggcgcacg
ccccgctcgaatctcgcgacctataccggcctgttcgacgccgtccgcaagctgttcgcc
gccacacccgaggcacgcaagcgccgctacgacgccggccgcttctccttcaacgtcgcg
aagggccgctgcccggcctgcgagggcgaaggcttcgtcagcgtcgaactcctgttcatg
ccgagcgtctacgccccctgcccgacctgccacggcacccgctacgcgcccgacacgctg
gaggtcacctggaacgggctgaccatcgcggacgtgctcgggctcaccgtcgagcgcgcc
tgcgacgccttcgcggacgagccgtccgtgctgcggccgctggccgtgctgcgggatctc
ggcctcggctacctgcgcctcggccagccggcgaccgaactctccggtggcgaagcccag
cgcatcaagctcgccacggagcttcaaaggggccagcgcgggggcacgctctacgttctc
gacgagccgacgacggggttacacccgaccgacgtggaccgcctcatgctccagctcaac
ggcctggtcgatgcgggcaacgcggtcgtcatggtcgagcacgacatgcgcgtcgtcgcc
ggggccgatcacgtcatcgatgttgggcccggtgccggaaatctcggcggcaccatcgtg
gcggccggccgtcccgaggacgtggccggggcgcgagggagccggacggcaccgtatctg
cgggacgaactcatggcctatgcgggccaggagtcttcaccacggcttgcgggctga |