Methylorubrum extorquens CM4: Mchl_3104
Help
Entry
Mchl_3104 CDS
T00809
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mchl_3104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_3104
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mchl_3104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
ACK83942
UniProt:
B7KS57
LinkDB
All DBs
Position
complement(3283849..3285897)
Genome browser
AA seq
682 aa
AA seq
DB search
MSRATRSAFDDVPPDGFDEDETEAASLDEAPEIDFDFEPGAVQAGTEIIRRFWSTLPNSP
GVYRMFDAKGDVLYVGKAKNLKARVGSYARGQAHSNRIARMIAQTAAMEFVTTATETEAL
LLEANLIKQLKPRFNVLMRDDKSFPYILLTSDGPAPQIVKHRGARRRKGNYYGPFANVWA
VNRTVNALQRAFLMRTCSDSYYENRTRPCLLYQIKRCSGPCTGEIALEDYSALADSARAF
LSGKSNAVKDRMREEMQRASEALEFERAARFRDRIAALSAIQGVQGVNTQGVEEADVFAI
DEQAGQFCIEVFFFRNFQNWGNRAYFPKADRSMSADEVLASFISQFYDDKPAPKLVLVSH
TIEDAELVAAALSSRVEHRVEVHQPQRGERKNLVDYAQRNAKEALGRRLADTASQGKLLT
ALGQAFGLDKPPRRVEVYDNSHISGTAAVGGMIVAGPTGFMKTHYRTFNIKSEELSPGDD
FGMMREVLTRRFKRLAKEAPRTPREGDAGEPQAPEKAVPTVAEVQDDPDAFPAWPDLVLI
DGGAGQLEAARASLAEIGVTGVPLVGIAKGRDRDAGRETFFVPGRSPFKLPPRDPVLYFV
QRLRDEAHRFAIGTHRARRKREMTKNPLDEIAGIGPTRKRALLHHFGTVKAIERAALEDL
AKAPGVNAATARAVYDFFHANA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgacccgatccgccttcgacgacgtcccgcccgacgggttcgacgaggac
gagaccgaggctgcctccctcgacgaggcgcccgagatcgacttcgatttcgagcccggt
gccgtccaggcgggcaccgagatcatccgccgattctggtcgaccctaccgaactcgccg
ggcgtgtaccggatgttcgacgccaagggcgacgtgctctacgtcggcaaggccaagaac
ctaaaggcccgcgtcggctcctacgcccgcggccaggcgcattccaaccgtatcgcccgc
atgatcgcccagacggcggcgatggagttcgtcaccacggcgaccgagacggaagcgctg
ctgctggaggccaacctcatcaagcagttgaagccgcgcttcaacgtgctgatgcgcgac
gacaagtcgttcccctacatcctgctgaccagcgacgggccggcgccgcagatcgtcaag
catcgcggcgcgcgccgccgcaagggcaactactacggccccttcgccaatgtctgggcg
gtcaaccgcacggtgaacgcgctccagcgcgccttcctgatgcggacctgctcggacagc
tattacgagaaccgcacccggccctgcctgctctaccagatcaagcgctgctccggcccc
tgcaccggcgaaattgccctcgaggactatagcgcgctcgccgacagcgcccgcgccttc
ctctcgggcaagtcgaacgcggtgaaggaccggatgcgcgaggaaatgcagcgcgcctcc
gaggcgcttgaattcgagcgtgccgcgcgcttccgcgaccgtatcgccgcgctctcggcg
atccagggcgtgcagggggtgaacacccagggggtcgaggaggccgacgtgttcgccatc
gacgagcaggcgggccagttctgcatcgaggtgttcttcttccgcaacttccagaactgg
ggcaaccgcgcctacttcccgaaggccgaccgctcgatgagcgcggacgaggtgctggcc
tcgttcatctcgcagttctacgacgacaagcctgccccgaaactcgtcctcgtcagccac
acgatcgaggatgccgaactcgtggccgccgccctgtcgagccgggtcgagcaccgcgtc
gaggtccaccagccgcagcggggcgagcgcaagaacctcgtcgattacgcgcagcgcaac
gccaaggaggcgcttggacgccggctcgccgacaccgcgtcgcagggcaagctgctgacg
gcgctgggccaagccttcggcctcgacaagccgccgcgccgtgtcgaggtctacgacaac
tcgcacatttccggcacggccgcggtcggcggcatgatcgtcgccgggccgaccggcttc
atgaagacgcattaccgcaccttcaacatcaagtcggaggagctgagccccggcgacgat
ttcgggatgatgcgcgaggtgctgacccgccgcttcaagcggctggccaaggaggcgccg
cgcaccccgcgggagggtgatgccggcgaaccgcaggccccggaaaaggccgttccaacg
gtggccgaggtgcaagacgatcccgacgctttccccgcctggcccgacctcgttctgatc
gacggcggcgccgggcagttggaggcggcccgcgcctcgctcgccgagatcggcgtgacc
ggcgtgccgttggtcggcatcgccaagggccgtgaccgcgatgccggccgcgagacgttc
ttcgtgcccggccgcagcccgttcaagctgccgccgcgcgatcccgtgctctatttcgtg
cagcgcctgcgtgacgaggcccatcgtttcgccatcggcacccatcgggcacggcgcaag
cgcgagatgacgaaaaacccgctcgacgagattgccgggatcggccccactcgcaagcgc
gcgctgctgcaccatttcggcacggtgaaagccatcgaacgcgccgccttggaggatctc
gccaaggcgccgggcgtgaacgccgccaccgcgcgggcggtctacgacttcttccatgcc
aatgcttga
DBGET
integrated database retrieval system
