Momordica charantia (bitter melon): 111013397
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Entry
111013397 CDS
T05045
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111013397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111013397
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111013397
mRNA degradation factors
5'-3' decay
Decapping complex
111013397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
WDR55
GerPC
Beta-prop_WDR41
YgjP-like
Sey1_3HB
Ribonuc_red_lgC
Motif
Other DBs
NCBI-GeneID:
111013397
NCBI-ProteinID:
XP_022143521
UniProt:
A0A6J1CQH7
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MFMASPGNPNPNPTNPPFDVQKFFKPXIANPTATSQNPTLMNSPPFPPPSSSYPPPTGPF
SYPLQNAPFHHPYHPPHHGNQVPYSQDQFSNLHHQRSLSYPTPPLQPSPPPVNMAVPQNN
PAQSSGARIMAMIRAPGSNLEPLPQPPTPLGSLPSPSSAVPEASAPPIMMTTIPMMQGVN
PGISPTGPVRMPSSKLPKGRHLIGEHVVYDVDVRLQGEIQPQLEVTPITKYGSDPQLVLG
RQIAVNKTYICYGLKQGNIRVLNINTALRSLFRGHEKRVTDMAFFAEDVHLLASVDVGGR
VYVWKISEGPDEESKPQIAGKVVISLHMEGGEGEIVHPRVCWHCHKQEVLVVGFGKSVLR
IDTTKVGKGESFSAEAPLKFSLEKLIDGVQLVGKHDGEVTELSMCQWMTSRLVSASMDGT
IKIWEDRKASPLLVLRPHDGQPVNAATFLTAPNRPDHIILITAGPLNREVKIWSSASEEG
WLLPSDAESWKCTQTLELKSSAESQLEEAFFNQIVALSQAGLLLLANAKKNAIYAIHLDY
GLNPATTRMDYIAEFTVTMPILSFTGTSEILDRLTHIVQVYCVQTQAIQQYALDLSQCLP
PPLDNLGLEKADSNVSQDSASVEGLAALFPSGSKPTEMPFTSSTPRASVLVNGSESAGAE
RYPASTTSQDATSAANTESKPVTLSPAASNTDIVSAASPPLPLSPRLSRNLSGFRTPVGG
FEPIAAVSDHAGDRRGNDYPVNRQIDAIHTNLSEVSSLDDESRNNEEKTSREDLSNVLNP
AIVFKHPTHLITPSEILMAVSSSETTNVIEGKSDVETNIQDVVVNNDVEDTELEVKEVGE
MKSPQNSEYASRGDPQNLPLENKEKFFCSQASDLGMEVARECCALSSETYVIEEAPQVDA
NIMDTEVDSEAGEGDRTSVKDVSEKVSESSISITPQIPTPSTKGKKNKGKSSQASGLASP
SPSVFNSNESSSEPCGSSSLPPPEATFSSFSAIQDTLNQIMNTQKEMQKQMQMTLAVPVT
KEGKRLEAALGRSMEKALKANNDALSARIQEESAKNEKLLRDTTQKITNLVANFVNKDLP
TFLEKALKKEMAAIGPAVVRTITPAIEKTISSGIADSFQRGVGDKAVNQLEKSVNSKLEA
TVARQIQAQFQTSGKQALQDALKSSFEASVIPAFEMSCKTMFEQVDSTFQKGLVEHAAAV
QQHLDSSHSSLALALRDSITSASTMTQSLSGELAEGQRKLIALATAGANASSINPLVTQL
SNGPLVALHEKVEVPLDPTKELSRLISERKYDEAFTTALQRSDVTIVSWLCSQVDLRAIL
SNLAFNQGVLLSLLQQLACDINKDRSRKIAWMTDVAAAINPADPMIAMHIRPIFEQVYQI
LNHQRSLPTISPVDLSGIRVIMHVINSMLVTCK
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggcttcccctgggaatccaaacccaaatccgacgaacccaccatttgatgtg
cagaaattctttaaacccrcaattgcaaaccctacggcgacctcccaaaaccctaccctc
atgaattcgcctccatttccgcctccttcttcctcttaccctcctcccactggtcctttc
tcttacccacttcagaacgcgccatttcaccatccctaccatccccctcaccatggcaat
caagttccgtactctcaggaccagttctccaatcttcaccatcagaggtctctttcttac
cccactcccccgcttcagccttctccgccgccggtcaacatggctgtccctcagaacaat
ccggctcagagctccggtgcccggataatggctatgattagagcccctggctctaatctt
gaaccgctccctcagcctcctactccattgggttcgttgccgtctccttcctcggccgtt
cctgaagcttcggcgcctccgataatgatgaccaccattcccatgatgcagggggtcaat
cctggcatctcccccacggggccggttcgaatgccgagcagtaagctccccaaagggcgg
catttgatcggcgagcatgtggtgtatgatgtagatgttaggcttcaaggagagatccag
ccacagctggaagtgacgccaattaccaagtatggttcagatcctcagctcgtgttgggg
cgtcaaattgcggtcaacaagacatatatatgctatggtttgaaacagggaaacattcga
gttcttaatatcaatactgcactaagatctttgtttcgaggccatgaaaagagggtcact
gacatggcattctttgccgaagatgttcaccttttggctagtgttgatgtaggtggacga
gtttatgtttggaagatttctgagggccctgatgaagaatctaagccgcaaattgctggg
aaagttgttatctcccttcatatggaaggaggagagggggaaattgtgcatccacgagtt
tgttggcattgtcacaaacaggaagttttggtagttggatttgggaagtccgtactgaga
attgacacaaccaaagttgggaagggtgaaagcttttctgccgaagctcctctcaaattt
tctcttgaaaagttgattgatggcgtccagcttgttggaaagcatgatggagaagtgact
gagttgtccatgtgtcagtggatgacttctcgattggtgtctgcttctatggatggaacg
atcaaaatatgggaggatcgtaaggcatcacctctgctggttttgaggccacatgatggc
caaccagttaatgcagctacttttttgactgctccaaatagaccagatcacattatactc
atcacagctgggcctcttaatcgggaagtgaaaatatggtcatctgcaagtgaggaaggt
tggctgcttcctagtgatgctgaatcatggaaatgcacccagaccctggagttgaagagt
tcagctgaaagtcaacttgaagaggcattctttaatcaaattgtagccttgtctcaagct
ggccttcttttacttgctaatgctaagaagaatgctatatatgcaatacacttggattat
ggtcttaatccagccacgacacggatggattacatagcagagttcactgtcacgatgccc
attttgagttttactggaacaagtgagatattagaccgtctaacacatattgtccaggtt
tattgcgtacaaacacaagctatacagcagtatgctttagacttatctcagtgcttaccc
ccaccattggacaatctggggttagagaaggcagattctaatgtttcacaggattctgca
agcgttgaagggctggctgcactgtttccctctgggagtaaaccaactgagatgcccttc
actagttctacacccagggcttcagtgctggtcaatggctctgaaagtgctggtgcagaa
agatatcctgcaagcaccacttctcaagatgcaacgtccgctgcaaatacagaatctaaa
cctgttacactgtcacctgcagctagtaatacagacattgtctctgctgcatcacctcct
cttcctttgagcccacgcttgtctagaaatctgtctggttttagaactccagtgggtggc
tttgagcctattgctgcagttagtgatcatgctggtgaccgacggggtaatgactaccca
gtcaaccgacaaatagatgccatacacacaaatttgtctgaagtgtcttcattggatgat
gaatccagaaacaacgaggagaaaacttcacgggaagatctgtctaatgtccttaatcct
gctattgtgtttaagcatccgactcatctgattaccccctctgagatactgatggctgtt
tcttcctctgaaactactaatgtcattgaaggaaagagtgatgtagagacaaatatccag
gatgtagttgttaacaatgatgttgaagatactgagctagaggttaaagaggtaggagaa
atgaagtctcctcagaatagtgaatatgctagtagaggtgaccctcaaaaccttcctttg
gagaacaaggaaaagttcttctgctcacaagcttcagatcttggtatggaagtggcccga
gaatgttgtgcactatcatctgaaacttatgtcattgaggaggccccacaagttgatgct
aatataatggatacagaggtagattccgaagctggtgagggagatagaacatctgtcaaa
gatgtttctgaaaaggtttctgaatcctctatatcaattactccgcaaattccaacacct
agtacaaaggggaaaaagaacaaggggaaaagttctcaagcttcaggattggcttcccca
tctccaagcgttttcaattctaacgaatcttccagtgaaccctgtggtagttcgagcctt
cccccaccagaagctactttttcttcattctcagccatccaagatacactgaatcagata
atgaatactcagaaagaaatgcagaagcagatgcagatgacacttgcagttcctgtcacc
aaagaaggtaaaaggctggaggcagctcttggacggagcatggagaaggcattaaaagcg
aataatgatgcattatcggctcggattcaggaagaaagtgcaaaaaatgagaagttgttg
cgagatactacacaaaagataaccaatctagttgcgaactttgtgaacaaggacttgcct
acctttttagaaaaagctctgaagaaggaaatggctgccattggacctgctgtggttcgc
acaataacgccagctattgagaaaacaatttcttctggcatcgcagattctttccagaga
ggagtaggtgataaggcagtgaatcaactagagaaatctgttaactcaaaacttgaagct
actgtcgctaggcaaattcaagcgcagtttcaaacctctggcaagcaagccctgcaggat
gcactaaaatctagttttgaagcatcagtaattcctgcctttgagatgtcgtgcaaaacc
atgttcgagcaagtagattctacctttcagaaaggactggttgaacatgcagctgcagtt
cagcagcacttggactcttcacattcttcgttggcacttgctctgagggattctataact
tcagcatcaacaatgacacagtccttgagtggagaattggctgaaggccaaagaaaattg
atagcccttgcaactgccggagcaaatgctagttccataaatccattggtcacccaacta
agcaatggaccattggtagctctccacgagaaggttgaggttcctttggatcctacaaaa
gaactgtcgagattgatatctgaaaggaaatatgatgaagctttcaccaccgctttacag
agaagtgatgtgaccattgtctcttggttatgttctcaggttgatcttagggccatcctg
tcaaatcttgcttttaatcaaggagtactgctgtctcttctgcaacaattagcttgcgac
atcaacaaggatagatctcggaaaattgcatggatgactgatgtggctgctgccataaac
cccgcagacccaatgatagcaatgcacattcgaccgatctttgaacaggtgtatcagatt
ttgaaccatcaacggagcctgccaacaatctctcctgtcgatctctcgggcattcgtgtt
atcatgcatgttatcaactccatgctggtaacttgtaaatga
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integrated database retrieval system
