Mycobacteroides chelonae: BB28_11605
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Entry
BB28_11605 CDS
T04665
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mche
Mycobacteroides chelonae
Pathway
mche03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BB28_11605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mche03400
]
BB28_11605
DNA repair and recombination proteins [BR:
mche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB28_11605
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BB28_11605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
AAA_25
nSTAND1
AAA_22
APS_kinase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
ScfRs
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ANA98322
LinkDB
All DBs
Position
2313145..2316099
Genome browser
AA seq
984 aa
AA seq
DB search
MADRLIVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGEKIAKQTPQQIVDQVLDMEEGLRFQVLAPVVRTRKGEFVDLFEQLNSQGYSRIRV
DGVVHSLTDPPKLKKQEKHDIEVVIDRLAVKASSKQRLTDSVETALRLADGIVVLEFVDA
EEDSPHRERRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECTGLGIKKEVDPDLVV
PDPDMTLAEGAIAPWSMGQNADYFVRLMAGLGDALGFDVDTPWKKLPAAAKKAILDGSSE
QVHVRYKNRYGRTRSYYAEFEGVLAFLQRRMEQTESEWAKERYEGFMRDIPCPVCNGTRL
KPEILSVTLTAGEHGTKSIAQVCDLSIAECAQFLNALTLGHREQAIAGQVLKEVQFRLGF
LLDVGLQYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIKHADWVVDIGPAAGEHGGQVVHSGTYAELLKNKHSVTG
SYLSGAASIPLPPMRRSIDAKRQVTVVGAREHNLKGIDVSFPLGVLTSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVTGLDQVDKLVRVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTIAQVLDMPIEEAAEFFEPITSIHRYLNTLVEVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGKTVYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGSVVAQGAPEAVAQTAGSHTGEFLADMLPKPQRNGKTP
AKAPAKSAAKSPAKPRTRKVVTPV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctgatcgtgcggggcgcgcgtgagcacaacctgcgcggtatcgacctt
gacctaccccgagacagcctcatcgtcttcacgggcctgtccggatccgggaagtccagt
ctggcctttgacaccatctttgccgaggggcagcgcaggtacgtcgaatcgctgtccgcg
tacgcccgccagttcctggggcagatggacaagcccgatgttgacttcatcgaggggttg
tcgcctgcggtatcgatcgaccagaaatccaccaaccgcaacccgcggtccacggtgggc
accatcaccgaggtctacgactacctgcgtctgttgtatgcgcgggccgggaccccacac
tgcccggtgtgcggggagaagatcgccaagcaaaccccgcagcagatcgtggatcaggtg
ctggatatggaggagggcctgcggttccaggtgctcgcccccgtggtccgcacgcgcaag
ggcgagttcgtcgacctcttcgagcagctgaactcgcagggttacagccgcattcgggtt
gacggcgtggtgcattcgctcaccgacccgcccaagctcaagaagcaggagaagcatgac
atcgaggtggtcatcgaccgtctcgccgtcaaggccagctccaagcagcgactgacggac
tcggtggagaccgcgctgcgcctcgccgacggcatcgtcgtgctcgagttcgtcgacgcc
gaggaagattccccgcaccgtgaacgcaggttctcggagaagctcgcgtgccccaacggt
cacccactggccgtggatgatcttgaaccgcggtcgttttcgttcaactcgccctacggc
gcctgccccgagtgcaccggtctgggaatcaagaaggaagtggatcccgatctggtggtc
cccgacccggatatgacgctcgccgagggcgccatcgcaccctggtcgatgggccagaac
gccgactacttcgttcggctcatggcgggattgggcgacgccctcgggttcgatgtggac
actccctggaagaagcttcccgcggccgccaagaaggcgatcctggacggctcgtccgag
caggttcatgtccgttacaaaaaccgatacggccgcacccgctcgtactatgccgagttc
gaaggcgtgctggccttcctgcagcgccgcatggagcagaccgagtccgaatgggccaag
gaacgctacgaaggcttcatgcgggacatcccgtgtcctgtgtgcaacggaacccggctc
aagccggagatcctctccgtgacgctgaccgcgggggagcacggcaccaaatcgatcgca
caggtctgtgacctgtcgatcgccgagtgcgcgcagttcctcaacgcactgaccctcggg
caccgtgagcaagccatcgcgggacaggtactcaaggaagtccagttccggctcgggttc
ctcttggacgtgggcctgcagtatctgtcgttgtcgcgcgcggcgggcacgctctccggt
ggtgaggcgcagcgcatccggctggccacccagatcggctccggtttggtgggtgtgctc
tatgtgctggacgagccgtccatcggcctgcatcagcgcgataaccgccgactcatcgag
acactcacgcggctaagggatctcggtaacacgttgatcgtcgtcgagcatgacgaggac
accatcaaacacgcagactgggtcgtcgacatcgggcccgcggcgggggagcacggcggc
caggtggtgcacagcggcacctacgccgagctgctgaaaaacaagcactccgtcacgggc
tcgtatctttctggggcagcgagcattccgctgccaccgatgcgccgttcgattgatgcc
aagcgtcaggtcactgtggtcggtgcgcgcgagcacaacctcaagggcatcgacgtctcc
ttcccgctcggggtattgacctcggtcaccggagtgtcgggttcggggaagtcgacactc
gtcaacgacatcctcgccacggtgttggccaacaaactcaacggtgcacggcaggtcccc
ggccggcatacccgcgtgaccggcctggatcaggtggacaagctcgtgcgggtggaccag
tcacctatcgggcgcacaccgcgctccaatccggctacctacacaggggtgttcgacaag
atccgcacactgttcgcggccaccaccgaggccaaggtgcgtggttatcaacccggccgg
ttctcgttcaatgtcaagggcgggcgctgcgaagcatgtacgggcgacggcaccatcaag
atcgagatgaacttccttccggacgtatacgttccgtgcgaggtgtgtcatggtgcgcgc
tacaaccgggagacactcgaggtccactacaaaggcaagaccatcgcgcaagtgctggac
atgcccatcgaggaggccgccgagttcttcgagcccatcacttccatccaccggtatctg
aacacgctggtggaggtcggtctgggctatgtgcggctggggcagccggctccgacactg
tccggtggtgaggcgcagcgcgtcaagctggctgctgagctgcagaagcgctcgacgggc
aagaccgtctacatcctcgacgagcccacgacagggctgcatttcgaggacatccgcaag
ctgctcaccgtgatcaacggcttggtcgacaagggcaacaccgtgatcgtgatcgagcac
aacctcgatgtcatcaagacgtcggactggatcatcgacatgggccccgaaggcggatcg
ggcggcggttccgtggtggcgcagggtgcaccggaagcggtggctcagaccgcgggtagc
cacaccggtgagttcctcgcggacatgttgcccaagccccaacgcaacggcaagaccccc
gccaaggctccggcgaagagcgccgcaaagtcgcccgccaaaccgcggaccaggaaggtt
gtcactccggtctag
DBGET
integrated database retrieval system
