Mycobacteroides chelonae: BB28_15730
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Entry
BB28_15730 CDS
T04665
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mche
Mycobacteroides chelonae
Pathway
mche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB28_15730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mche03019
]
BB28_15730
03016 Transfer RNA biogenesis [BR:
mche03016
]
BB28_15730
Enzymes [BR:
mche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BB28_15730
Messenger RNA biogenesis [BR:
mche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BB28_15730
Transfer RNA biogenesis [BR:
mche03016
]
Prokaryotic type
tRNA degradation factors
BB28_15730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
Maf1
Motif
Other DBs
NCBI-ProteinID:
ANA99080
LinkDB
All DBs
Position
complement(3120827..3123094)
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AA seq
755 aa
AA seq
DB search
MSVTEIEEGVFESTATIDNGTFGTRTIRFETGRLAQQAAGSVVAYLDDETMLLSATTASK
SPKDHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVSGLR
NEIQVVVTVLSLNPADLYDVLAINAASASTQIAGLPFTGPVGGVRVALIDGQWVAFPTIE
QLETAVFDMVVAGRKTADDVAIMMVEAEATDNVIALVEGGAGAPTEAVVAEGLEAAKPFI
AALCTAQQELAEKAAKPVGEYPLFPDYQDDAFAAVAAVATEPLSQALSIAGKAERDEKTD
EIKVEVLGRLQEGFDGREKEIGAAFRSLTKKLVRQRILKDQFRIDGRGVTDIRALSAEVA
VIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGR
VGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLN
AGVPLKAPVAGIAMGLVSDDIELADGTTERRFVALTDILGAEDAFGDMDFKVAGTKDFVT
ALQLDTKLDGIPSQVLAAALSQAKDARATILEVMAEAIDAPDEMSPYAPRITTIKVPVDK
IGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINAIANPQLPKIG
ERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVKVGDKIQVEIADIDN
RGKISLVPVGDDEAADASADSNGAAEAKPADAVAE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttacagaaattgaagaaggcgttttcgagtccaccgcgaccatcgacaacggg
accttcggcacccgcaccattcggttcgagaccgggcggctggcccagcaggccgccggc
tccgtcgtcgcctacctggatgacgagaccatgctgctgtcggccacgaccgccagcaag
agccccaaggatcatttcgacttcttcccgctgaccattgacgtcgaggagcggatgtat
gccgcgggccggattcccggctccttcttccgccgtgagggacgtccctccaccgacgcc
atcctgacgtgtcgtctcatcgaccggccgctgcgcccgaccttcgtcagcgggctgcgc
aacgaaatccaggtcgtggtgacggtgctgagcctgaaccccgccgacctgtacgacgtg
ctggccatcaacgccgcctcggcgtccacgcagatcgccgggctgcccttcaccggcccc
gtcggcggcgtccgggtggccctgatcgacggccagtgggttgcgttcccgacgatcgag
cagctggagacggccgtgttcgacatggtcgtcgccggccgtaagaccgccgacgatgtc
gccatcatgatggtcgaggccgaggccaccgacaacgtcatcgcgcttgtggaaggcgga
gcaggcgctcccaccgaagccgtcgtcgccgagggtcttgaggccgccaagccgttcatc
gccgcgctgtgcaccgcgcagcaggagctggccgagaaggccgccaagcccgtcggcgag
taccccctgttccccgactaccaggacgacgcgttcgccgccgtcgctgccgtggccacc
gagccgctgtcacaggcgctgtccatcgcgggcaaggccgagcgcgacgagaagaccgat
gaaatcaaggtcgaggttctaggccgtctgcaggagggcttcgatggccgcgagaaggag
atcggcgcggcattccgttcgctcaccaagaagctggtgcgccagcgcatcctgaaggac
cagttccgcatcgacggccgcggtgtcaccgacatccgcgcgctgtccgccgaggtcgct
gtgatcccgcgagcacacggcagcgcgctcttcgagcgtggcgagacccagatcatgggc
gtcaccaccctcgacatggtcaagatggcccagcagatcgactcgctggggccggagacc
tcgaagcgctacatgcaccactacaacttcccgccgttctccaccggtgagaccggccgc
gtcggctcgcccaagcgtcgcgagatcggccacggtgcgctcgccgagcgtgcgctcatg
ccggtgctgccgagcgtcgaggagttcccgtacgccatccgtcaggtatcggaagcgttg
ggctccaacggatccacctcgatgggttcggtctgcgcctcgacgctgtcgctgctgaat
gccggtgtgccgctgaaggctcccgtcgccggtatcgccatgggcctggtgtccgatgac
atcgaactggccgacggcaccaccgagcgtcgctttgttgcgctcaccgacatcctgggc
gccgaagatgccttcggcgacatggacttcaaggtcgccggcaccaaggacttcgtcacg
gctctgcagctcgacaccaagctcgacggcatcccgtcgcaggtgctggccgccgcgctg
tcgcaggccaaggacgctcgcgccaccatcctcgaggtgatggcagaggccatcgacgca
cccgacgagatgagcccgtacgcgccgcgcatcacgacgatcaaggtgccggtcgacaag
atcggtgaggtgatcgggcccaagggcaagatgatcaactcgatcaccgaggagaccggc
gccagcatctccatcgaggatgatggcaccgtcttcgtgggcgcctccaacggcgaggcg
gcgcaggccgcgatcgacaagatcaacgccatcgccaacccgcagttgcccaagatcggt
gagcgtttcctcggaaccgtggtcaagacaactgatttcggtgcgttcgtgtcgctgctt
ccgggccgtgacggactggtgcacatcagcaagctcggcaagggcaagcggatcgccaag
gtcgaggacgtggtcaaggtcggcgacaagattcaggtcgagatcgccgacatcgacaac
cgcggcaagatctcgctggtccccgtcggcgacgacgaggccgcggatgcttccgccgac
agtaacggtgcggccgaggccaagccggcagatgccgtcgcggagtag
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