KEGG   Mycobacteroides chelonae: BB28_15730
Entry
BB28_15730        CDS       T04665                                 
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
mche  Mycobacteroides chelonae
Pathway
mche03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mche00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BB28_15730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mche03019]
    BB28_15730
   03016 Transfer RNA biogenesis [BR:mche03016]
    BB28_15730
Enzymes [BR:mche01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BB28_15730
Messenger RNA biogenesis [BR:mche03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BB28_15730
Transfer RNA biogenesis [BR:mche03016]
 Prokaryotic type
  tRNA degradation factors
   BB28_15730
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 KhpA-B_KH Maf1
Other DBs
NCBI-ProteinID: ANA99080
LinkDB
Position
complement(3120827..3123094)
AA seq 755 aa
MSVTEIEEGVFESTATIDNGTFGTRTIRFETGRLAQQAAGSVVAYLDDETMLLSATTASK
SPKDHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVSGLR
NEIQVVVTVLSLNPADLYDVLAINAASASTQIAGLPFTGPVGGVRVALIDGQWVAFPTIE
QLETAVFDMVVAGRKTADDVAIMMVEAEATDNVIALVEGGAGAPTEAVVAEGLEAAKPFI
AALCTAQQELAEKAAKPVGEYPLFPDYQDDAFAAVAAVATEPLSQALSIAGKAERDEKTD
EIKVEVLGRLQEGFDGREKEIGAAFRSLTKKLVRQRILKDQFRIDGRGVTDIRALSAEVA
VIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGR
VGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLN
AGVPLKAPVAGIAMGLVSDDIELADGTTERRFVALTDILGAEDAFGDMDFKVAGTKDFVT
ALQLDTKLDGIPSQVLAAALSQAKDARATILEVMAEAIDAPDEMSPYAPRITTIKVPVDK
IGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINAIANPQLPKIG
ERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVKVGDKIQVEIADIDN
RGKISLVPVGDDEAADASADSNGAAEAKPADAVAE
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgtctgttacagaaattgaagaaggcgttttcgagtccaccgcgaccatcgacaacggg
accttcggcacccgcaccattcggttcgagaccgggcggctggcccagcaggccgccggc
tccgtcgtcgcctacctggatgacgagaccatgctgctgtcggccacgaccgccagcaag
agccccaaggatcatttcgacttcttcccgctgaccattgacgtcgaggagcggatgtat
gccgcgggccggattcccggctccttcttccgccgtgagggacgtccctccaccgacgcc
atcctgacgtgtcgtctcatcgaccggccgctgcgcccgaccttcgtcagcgggctgcgc
aacgaaatccaggtcgtggtgacggtgctgagcctgaaccccgccgacctgtacgacgtg
ctggccatcaacgccgcctcggcgtccacgcagatcgccgggctgcccttcaccggcccc
gtcggcggcgtccgggtggccctgatcgacggccagtgggttgcgttcccgacgatcgag
cagctggagacggccgtgttcgacatggtcgtcgccggccgtaagaccgccgacgatgtc
gccatcatgatggtcgaggccgaggccaccgacaacgtcatcgcgcttgtggaaggcgga
gcaggcgctcccaccgaagccgtcgtcgccgagggtcttgaggccgccaagccgttcatc
gccgcgctgtgcaccgcgcagcaggagctggccgagaaggccgccaagcccgtcggcgag
taccccctgttccccgactaccaggacgacgcgttcgccgccgtcgctgccgtggccacc
gagccgctgtcacaggcgctgtccatcgcgggcaaggccgagcgcgacgagaagaccgat
gaaatcaaggtcgaggttctaggccgtctgcaggagggcttcgatggccgcgagaaggag
atcggcgcggcattccgttcgctcaccaagaagctggtgcgccagcgcatcctgaaggac
cagttccgcatcgacggccgcggtgtcaccgacatccgcgcgctgtccgccgaggtcgct
gtgatcccgcgagcacacggcagcgcgctcttcgagcgtggcgagacccagatcatgggc
gtcaccaccctcgacatggtcaagatggcccagcagatcgactcgctggggccggagacc
tcgaagcgctacatgcaccactacaacttcccgccgttctccaccggtgagaccggccgc
gtcggctcgcccaagcgtcgcgagatcggccacggtgcgctcgccgagcgtgcgctcatg
ccggtgctgccgagcgtcgaggagttcccgtacgccatccgtcaggtatcggaagcgttg
ggctccaacggatccacctcgatgggttcggtctgcgcctcgacgctgtcgctgctgaat
gccggtgtgccgctgaaggctcccgtcgccggtatcgccatgggcctggtgtccgatgac
atcgaactggccgacggcaccaccgagcgtcgctttgttgcgctcaccgacatcctgggc
gccgaagatgccttcggcgacatggacttcaaggtcgccggcaccaaggacttcgtcacg
gctctgcagctcgacaccaagctcgacggcatcccgtcgcaggtgctggccgccgcgctg
tcgcaggccaaggacgctcgcgccaccatcctcgaggtgatggcagaggccatcgacgca
cccgacgagatgagcccgtacgcgccgcgcatcacgacgatcaaggtgccggtcgacaag
atcggtgaggtgatcgggcccaagggcaagatgatcaactcgatcaccgaggagaccggc
gccagcatctccatcgaggatgatggcaccgtcttcgtgggcgcctccaacggcgaggcg
gcgcaggccgcgatcgacaagatcaacgccatcgccaacccgcagttgcccaagatcggt
gagcgtttcctcggaaccgtggtcaagacaactgatttcggtgcgttcgtgtcgctgctt
ccgggccgtgacggactggtgcacatcagcaagctcggcaagggcaagcggatcgccaag
gtcgaggacgtggtcaaggtcggcgacaagattcaggtcgagatcgccgacatcgacaac
cgcggcaagatctcgctggtccccgtcggcgacgacgaggccgcggatgcttccgccgac
agtaacggtgcggccgaggccaagccggcagatgccgtcgcggagtag

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