Mycobacteroides chelonae: BB28_19815
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Entry
BB28_19815 CDS
T04665
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mche
Mycobacteroides chelonae
Pathway
mche03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BB28_19815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mche03021
]
BB28_19815
03400 DNA repair and recombination proteins [BR:
mche03400
]
BB28_19815
Enzymes [BR:
mche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BB28_19815
Transcription machinery [BR:
mche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BB28_19815
DNA repair and recombination proteins [BR:
mche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BB28_19815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ANA99837
LinkDB
All DBs
Position
complement(3963786..3967154)
Genome browser
AA seq
1122 aa
AA seq
DB search
MQTDSFEWLVGSPRWREVATARGEVNPTGGLEEILTELSPIEDFSGSMSLSFSDPRFDEV
KAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEMGTFIINGTERVV
VSQLVRSPGVYFDENIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVT
VLLKALGWTNEQIVERFGFSEIMMGTLEKDNIAGPDEALLDIYRKLRPGEPPTKESAQAL
LENLFFKEKRYDLARVGRYKVNKKLGLGGANPALVTATTLTEEDVVATIEYLVRLHEGQT
TMTAPGGLEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAIT
PQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLTRDRAGLEVR
DVHPSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVSEGVVTDEIHYLTA
DEEDRHVVAQANSPVDADGRFTEDKILVRRKGGEVEFVSATEVDYMDVSPRQMVSVATAM
IPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEKAGVIEEV
SADYVTVMADDGTRQSYRLRKFARSNHGTCANQKPIVDEGQRVEVGQVIADGPCTENGEM
ALGKNLLVAVMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDI
PNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVR
DTSLKVPHGESGKVIGIRVFSRDDDDDLPAGVNELVRVYVAQKRKISDGDKLAGRHGNKG
VIGKILPVEDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWVAKTGWNIEGNPEWA
QNLPEDLQSAPADTRTATPVFDGAREEELTGLLSSTLPNRDGEVMVDGDGKARLFDGRSG
EPFPYPVTVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAM
QAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVE
VLSKDGAAIEMRDGDDEDLERAAANLGINLSRNESASIEDFA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacggattcctttgaatggctggttggctcaccccggtggcgtgaagttgcaact
gctcgcggtgaggtgaacccgaccggcggccttgaggagatcctcacggagctttcgccg
atcgaggacttctcgggctcgatgtcgctgtctttcagcgacccgcgcttcgacgaggtc
aaggcgcccgtcgacgagtgcaaagacaaggacatgacgtacgcggctccgctgttcgtc
acggccgagttcatcaacaacaacaccggcgagatcaagagccagacggtcttcatgggt
gatttcccgatgatgaccgagatgggcaccttcatcatcaacggcaccgagcgcgtggtc
gtgtcgcagctcgtccgttcgccgggtgtctacttcgacgagaacatcgataagtcgacc
gagaagaccctgcacagcgtcaaggtcatccccggccgtggtgcatggctcgagttcgat
gtcgacaagcgcgacaccgtgggtgtgcgcatcgatcgcaagcgtcgtcagcccgtcacc
gtgctgctgaaggcactcggctggaccaacgagcagatcgtcgagcgtttcgggttctcc
gagatcatgatggggaccctggagaaggacaacatcgccggtcccgacgaggcgctgctg
gacatctaccgcaagctgcgtccgggcgagccgccgaccaaggagtccgcgcaggccctg
ctggagaacctgttcttcaaggagaagcgttacgacctggcccgcgtgggtcggtacaag
gtgaacaagaagctgggtcttggcggtgccaacccggctctggtgactgccaccacgctc
accgaggaagacgtcgtcgccaccatcgagtacctggtgcgtctgcacgagggccagacc
acgatgaccgcccccggcggcctcgaggtccccgtcgaggtcgacgacatcgatcacttc
ggtaaccgtcgtctgcgtactgtcggcgagctgatccagaaccagatccgggtcggcctg
tcgcgtatggagcgcgtcgtgcgcgagcgcatgaccactcaggacgtcgaggcgatcact
ccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttcggaacc
agccagctgtcgcagttcatggaccagaacaacccgctgtcgggtctgacccacaagcgt
cgtctgtcggcgctgggccccggtggtctgactcgtgaccgcgccggccttgaggtccgc
gacgtgcacccctcgcactacggccgcatgtgcccgatcgagaccccggaaggcccgaac
atcggtctgatcggttcgctgtcggtgtacgcgcgggtcaacccgttcggcttcatcgag
acgccgtaccgcaaggtgtccgagggtgtcgtcaccgacgagatccactacctgaccgcc
gacgaagaggaccgccacgtggtggcgcaggccaactcgcctgtggatgccgacggccgc
ttcaccgaggacaagatcctggtccgccgtaagggtggcgaggtcgagttcgtctcggcg
accgaggtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatg
atcccgttcctcgagcacgacgacgccaaccgtgccctcatgggtgccaacatgcagcgc
caggcggttccgctggtgcgcagcgaggccccgctggtcggtaccggtatggagctgcgt
gccgccatcgacgccggcgacgtcgtcgtcgcggagaaggccggtgtcatcgaagaggtg
tccgccgactacgtcaccgtgatggccgacgacggcacccgccagagctaccggttgcgc
aagttcgcccgttccaaccacggcacctgcgccaaccagaagcccatcgtggacgaaggc
cagcgggtcgaggtcggtcaggtcatcgccgacggtccttgcaccgagaacggcgaaatg
gccctcggtaagaacctgctcgtggctgtcatgccgtgggaaggccacaactacgaggac
gccatcatcctgtccaaccgtctggtggaagaggacgtgctcacctcgattcacatcgaa
gagcacgaaatcgatgcgcgcgacaccaagctgggcgctgaggagatcacccgggacatc
ccgaacgtctccgatgaggtgctggcagatctcgacgagcgcggcatcgttcgcatcggc
gccgaggtccgcgacggcgacatcctcgtcggcaaggtcaccccgaagggtgaaaccgag
ctgacccccgaggagcgcctgctgcgtgccatcttcggtgagaaggcccgcgaggttcgc
gacacctccctcaaggtgccgcacggtgagtccggcaaggtcatcggcatccgcgtcttc
tcgcgtgatgacgacgacgacctgcccgccggcgtgaacgagctcgttcgcgtgtacgtc
gcgcagaagcgcaagatctccgacggtgacaagctggccggacgccacggcaacaagggc
gtcatcggcaagatcctgcccgtcgaggacatgccgttcctgcccgatggcaccccggtg
gacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggccagatcctggag
acccacctggggtgggtggccaagaccggctggaacatcgagggcaaccccgagtgggcg
cagaacctccccgaggatctgcagtcggccccggccgacacccgcacggccaccccggtg
ttcgacggcgcccgcgaggaggagctgaccggactgctgtcctcgacgctgcccaaccgg
gacggcgaggtcatggtggacggtgacggcaaggcacggctgttcgacggccgtagcggt
gagccgttcccgtacccggtgaccgtcggctacatgtacatcctgaagctgcaccacttg
gtcgacgacaagattcacgcgcgttcgaccgggccgtactcgatgatcacccagcagccg
ctcggtggtaaggcacagttcggtggtcagcgattcggtgagatggagtgctgggccatg
caggcctacggtgcggcgtacacgctgcaggagctgttgaccatcaagtccgacgacacc
gtcggtcgcgtgaaggtctacgaggcgatcgtcaagggcgagaacatccccgagccgggt
atcccggagtcgttcaaggttctgctcaaggaactccagtcgctgtgcctgaacgtggag
gtgctgtccaaggacggcgccgccatcgaaatgcgcgacggcgacgacgaggacctggag
cgcgctgccgcgaacctgggaatcaacttgtcccgcaacgaatctgcgtccattgaggac
ttcgcctaa
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