Micromonospora chalcea: PVK74_05260
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Entry
PVK74_05260 CDS
T08919
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mchl
Micromonospora chalcea
Pathway
mchl00040
Pentose and glucuronate interconversions
mchl01100
Metabolic pathways
mchl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PVK74_05260
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVK74_05260
Enzymes [BR:
mchl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PVK74_05260
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
WDQ01201
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Position
1125809..1127374
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AA seq
521 aa
AA seq
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MRRPVALRLHAALATAVVGIAVAVALPSPQASAAAGSATGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCGRASSSTPIIIEVTGTINHGNTSKVSGSSCNTADGVIELKQISNVTIIGV
GSGAVFDQLGIHIRDSRNIIIRNVTVRNVKKSGSPTSNGGDAIGMESSVRNVWVDHVTLE
ASGGESEGYDGLFDMKDDTQYVTLSYSILRNSGRGGLIGSSESDRGNGYITFEHNLYENI
DSRTPLLRGGIAHMFNNHYNGLHESGINSRAGARAKVDSNYFRNSKDVLGTFYTSERGTW
QVSGNIFDNVTWSSPGSDNYPAGPNVTSTTTVSVPYSYRLDAASCVPDIVRQTAGANTGL
RVSDGNCTPQSPAPTTPAPTTPAPTTPPPGTTTPPPSGGTNLSLVSGAGADGSSKADGTS
YGNVRDGNLSTYWSPSGSTGTVSIKWGSATTVSRVVIREPSGTSGSIGSWQLVNNDTGAV
LASGSGAGQITFGATSLKKINFKINSSSGTPRVGEFETYAS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccagtcgcgctgcgactccacgcggcactggccacggcggtcgtcggtatc
gccgtcgccgtggcgctcccgtccccgcaggcgtcggcggcggccggcagcgccaccggc
tacgccacccagaacggcggcacgaccggcggcgcgggcgggcagaccgtacgcgccacc
accggcaccgccatccacgccgcgctctgcggccgggccagcagcagcaccccgatcatc
atcgaggtgaccgggaccatcaaccacggcaacaccagcaaggtctccggatcgagctgc
aacaccgccgacggcgtgatcgagctgaagcagatcagcaacgtcacgatcatcggggtg
ggcagcggcgccgtcttcgaccagctcggcatccacatccgcgactcccgcaacatcatc
atccgcaacgtgacggtgcgcaacgtcaagaagtccggctcgcccacctccaacggtggt
gacgcgatcggcatggagagcagcgtccgtaacgtctgggtcgaccacgtgacgctggag
gcgtccggcggggagtcggagggctacgacggcctgttcgacatgaaggacgacacccag
tacgtgacgctgtcgtacagcatcctgcgtaactccggccgcggtggcctgatcggatcg
agtgagagcgaccgcggcaacggctacatcacgttcgagcacaacctgtacgagaacatc
gactcccgtacgccgttgctgcgcggcggcatcgcccacatgttcaacaaccactacaac
gggctgcacgagtcgggcatcaactcccgggccggggcgcgggccaaggtggacagcaac
tacttccgcaactccaaggacgtgctcggcacgttctacaccagcgagcgcggcacctgg
caggtcagcggcaacatcttcgacaacgtgacctggtcctcgccgggcagcgacaactac
ccggcggggccgaacgtgacctcgacgaccaccgtgagcgtcccgtactcgtaccggctc
gacgcggcgagctgtgtgccggacatcgtgcggcagacggcgggcgcgaacaccggcctg
cgggtgtccgacggcaactgcacgccgcagtccccggcgccgaccacgccggcgccgacc
acgccggcgccgaccacgccgccgcccgggacgaccaccccgccgccgtccggcgggacc
aacctgagcctcgtctccggcgccggcgcggacgggtccagcaaggccgacggcaccagc
tacggcaacgtgcgcgacggcaacctgagcacctactggtcgccgtcggggtcgaccggc
accgtctcgatcaagtggggctcggccaccaccgtgtcccgcgtggtcatccgcgagccg
tccggcacctcgggctcgatcgggtcgtggcagctcgtcaacaacgacaccggcgcggtg
ctggcctccggcagcggggccggccagatcaccttcggtgcgacctcgctgaagaagatc
aacttcaagatcaacagctccagcggtacgccgagagtcggcgagttcgagacgtacgcc
agctag
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