Paramicrobacterium chengjingii: HCR76_03270
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Entry
HCR76_03270 CDS
T07557
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mchn
Paramicrobacterium chengjingii
Pathway
mchn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mchn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCR76_03270 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchn03021
]
HCR76_03270 (rpoB)
03400 DNA repair and recombination proteins [BR:
mchn03400
]
HCR76_03270 (rpoB)
Enzymes [BR:
mchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCR76_03270 (rpoB)
Transcription machinery [BR:
mchn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HCR76_03270 (rpoB)
DNA repair and recombination proteins [BR:
mchn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HCR76_03270 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QPZ39111
UniProt:
A0ABX6YK32
LinkDB
All DBs
Position
654236..657727
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAARNATTTTSKNGRNASRPSFAKISDTLTVPDLLALQTESFDWLVGNDNWKDRVENAA
ESDRKDLPNDSGLEEIFEEISPIEDLGETMQLSFANPYLEPEKYSIEECTERGKTYAAPL
YVEAEFMNHLTGEIKTQTVFMGDFPLMTEKGTFIINGTERVVVSQLVRSPGVYFDRTPEK
TSDKDVFSARIIPSRGAWLEFEIDKRDQVGVRVDRKRKQSVTTFLKALGMTSEEILAEFA
GYESIASTLEKDPILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGR
YKINKKLGLEAPLSDSVLTVEDVVATIKYLVRLHAGETTFEGVRNGKSADIRLDIDDIDN
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLATFARINAFGFIETPYRRIVKGKVTEKVDYLTAMEEEDYIVAQANAVLNDDS
TFRDDRVLARKEDGEVDLVPVDEIAYMDVSPRQMVSVGTSLIPFLEHDDANRALMGANMQ
RQAVPLLRSESPYVGTGMEGFAAIDAGEVISAEKAGVVSRVSADSVTLQLDEGGTKTYYL
DKFLRSNQGNSYNHRVIVNEGDRVEAGEVVADGPSTENGELALGKNLLVAFMPWEGLNFE
DAIILSQNVVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLKDLDERGVIRI
GAEVHPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGENGTVIAVKE
FDAEEGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVISKILPVEDMPFLSDGT
PVDIILNPLGIPGRMNFGQVLETHLGWIANQGWKVEGNPEWAQGLPAETREGEPGTKVAT
PVFDGAEEHEIAGLLDATLPNRDGERMITSTGKTRLFDGRSGEPFPEPVSVGFMYILKLH
HLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSD
DILGRVKVYESIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTAVSLRDTDDDA
FRAAEELGINISSRFESSSIDEI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcgcaacgcaaccaccaccacatccaagaacggccgtaacgcatctcgg
ccttcattcgccaagatcagtgacacgctgaccgtcccagatcttctggcactgcagacg
gagagtttcgactggcttgtcggcaacgacaactggaaggaccgcgtcgagaacgcggcg
gaatctgaccgcaaggacctgccgaacgattcgggtctcgaggagatcttcgaggagatc
tctccgatcgaggacctcggcgagacgatgcagctgtcgttcgccaacccgtacctcgag
cccgagaagtactcgatcgaggagtgcaccgagcgcggtaagacatatgccgctccgctg
tacgtcgaggctgagttcatgaaccacctcacgggtgagatcaagactcagacggtgttc
atgggcgacttcccgcttatgacggagaagggcacgttcatcatcaacggcaccgagcgt
gtcgtcgtgtcccagctcgttcgcagccccggcgtgtacttcgatcgcacaccagagaag
acaagcgacaaggatgtcttctctgcgcgcatcattccgagccgcggtgcatggcttgag
tttgaaatcgacaagcgcgatcaggttggcgtgcgcgtcgaccgcaagcgcaagcagtcg
gtgacgacgttcctcaaggccctcggcatgacgagcgaagagatcctcgccgagttcgct
ggctatgagtcgatcgcgagcacgctcgagaaggatccgatcctcacgaaggaagacgca
cttcgcgacatctaccgcaagctgcgtccgggtgagcaggttgccgctgaggcagctcgc
gcgctcctcgacaacttctacttcaacccgaagcgttacgatctcgccaaggtcggccgc
tacaagatcaacaagaagcttggtcttgaagcgccgctcagcgattcggtgctcacggtt
gaagacgtcgtcgcgacgatcaagtaccttgttcgcctgcacgcaggtgagacgacgttc
gagggtgtccgcaacggcaagagcgccgacattcgtctcgacatcgacgacatcgacaac
ttcggcaaccgccgcatccgcgccgtcggcgagctcatccagaaccaggttcgcaccgga
ctgtcgcgcatggagcgcgttgtgcgtgagcgcatgacaacgcaggacatcgaagcgatt
acaccgcagactctgatcaacgtgcgccccgtcgtcgccgcgatcaaggagttcttcgga
acaagccagctgtcgcagttcatggaccagaacaacccgcttgccggtctgacgcacaag
cgtcgtctctcggctcttgggccgggcggcctgtcgcgtgagcgcgctggcgtcgaggtt
cgtgacgttcacccgtcgcactacggccgcatgtgcccgatcgagacccctgaaggcccg
aacatcggtctgatcggctcgctcgccacgttcgcccgcattaacgcgttcggcttcatc
gagacgccgtaccgtcgcatcgtgaagggcaaggtcaccgagaaggtcgactacctcacc
gcgatggaagaagaggactacatcgtcgctcaggccaacgcggttttgaacgatgacagc
accttccgcgacgaccgcgtccttgcccgcaaggaagacggcgaggtcgacctcgttccc
gttgacgagatcgcgtacatggacgtctctccgcgccagatggtatcggtcggtacgtcg
ctgattccgttcctcgagcacgacgatgcaaaccgcgcactcatgggcgcgaacatgcag
cgtcaggctgtgccgctgctgcgcagcgagtcgccgtacgtcggaacgggtatggaaggc
ttcgctgctatcgacgccggcgaggtcatctcagctgaaaaggctggcgtcgtctcgcga
gtatccgcagacagcgtgacgctccagctcgacgagggtggcaccaagacgtactacctc
gacaagttcctccgttcaaaccagggcaacagctacaaccaccgagtcatcgtcaacgag
ggagaccgcgttgaggctggcgaggtcgtcgctgacggtccctcgacagagaatggcgag
cttgcactcggcaagaacctgctcgttgcattcatgccgtgggagggcctcaacttcgag
gacgccattatcctcagccagaacgtggtgaaagacgacaccctcagctcgattcacatc
gaggagtacgaggtcgacgctcgcgacaccaagctcggcaaggaagagatcacgcgtgat
ctgcccaacgtgagccctgacctgctcaaggatctcgatgagcgcggagttatccgcatc
ggcgccgaagttcaccccggtgacattctcgtcggcaaggtcacgccgaagggcgagacc
gagctcagcgctgaagagcgactgcttcgcgcaatcttcaacgagaagagccgcgaggtg
cgcgacacgagcctcaaggttcctcacggtgagaacggaacggtcattgccgtcaaggag
ttcgacgcagaagaaggagacgacgagctcggctcgggcgtcaaccgccgcgtcgttgtc
tacatcgctcagaagcgcaagatcaccgagggcgacaagctcgccggacgccacggaaac
aagggcgtcatctcgaagatcctgccggtggaggacatgccgttcctctccgatggaact
ccggtcgacatcatcctcaacccgcttggcattcctggccgcatgaacttcggccaggtg
cttgagacgcacctcggctggatcgccaaccagggctggaaggttgagggcaacccggag
tgggcacagggcctaccggcagaaacccgcgagggcgagcccggtaccaaggttgctacg
ccggtcttcgacggtgctgaagagcacgagatcgctggcctgcttgacgcgaccctcccg
aaccgcgacggtgagcgcatgatcacctcgaccggaaagacccgtctcttcgacggtcgt
tcgggcgagccgttccccgagccggtttcggtcggctttatgtacatcctgaagctgcac
cacctggtcgacgacaagatccacgcacgttcgacgggaccgtactcgatgatcactcag
cagcctctcggcggaaaggcgcagttcggtggacagcgcttcggcgagatggaggtctgg
gcgctcgaggcatacggtgcggcctacgcactccaggagcttctgacgatcaagtcggac
gacatcctcggccgtgtcaaggtgtacgagtcgatcgtcaagggcgagaacatccaggag
ccgggcattcccgagagcttcaaggtgctcatgaaggaaatgcagtcgctgtgcttgaac
gtcgaggtactctcggccgatggcaccgcggtaagcctgcgcgacaccgacgacgacgca
ttccgcgccgccgaggagttgggcatcaacatttcctccaggttcgagtcctcgtcgatt
gacgagatctaa
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integrated database retrieval system
