Mycolicibacterium chitae: MCHIJ_45560
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Entry
MCHIJ_45560 CDS
T06603
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcht
Mycolicibacterium chitae
Pathway
mcht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCHIJ_45560 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcht03400
]
MCHIJ_45560 (fpg)
Enzymes [BR:
mcht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MCHIJ_45560 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCHIJ_45560 (fpg)
DNA repair and recombination proteins [BR:
mcht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCHIJ_45560 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DUF5324
Motif
Other DBs
NCBI-ProteinID:
BBZ05119
LinkDB
All DBs
Position
complement(4759483..4760343)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLANHVLDRSISAVRVHHPRAVRRHEAGPADLTARLLDARIVETGRRG
KYLWLVLSTEEALVVHLGMSGQMLIGPVPRSDHVRIAALFDDGTTLSFVDQRTFGGWQLA
ELVEVDGAVLPEPVAHIARDPLDPRFDPDAVIKVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRARINGARLAEKLTRPQLRAALDAAAEVMHEALAQGGTSFDALYVNVNGESGYFD
RSLDAYGREGEPCRRCGAPIRREKFMNRSSFYCPRCQPRPRAPRTK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtggaggtggttcgtcgcggcctggcgaaccacgtcctggac
cgctcgatcagcgcggtgcgggtgcaccacccccgcgcggtgcgccggcacgaggccggg
cccgcggacctgaccgcccggctgctcgatgcccggatcgtcgagaccggccgacgcggc
aagtatctgtggctggtgctgtccaccgaggaggcgctggtggtgcacctcgggatgagc
ggtcagatgttgatcggcccggtgccgcgctccgatcacgtccggatcgcggcgctgttc
gacgacggcaccacgctgagcttcgtcgaccagcgcacgttcggcggctggcagcttgcc
gagttggtcgaggtcgacggtgcggtgctgcccgaacccgtcgcgcacatcgcccgcgac
ccgctggatccgcggttcgaccccgatgcggtgatcaaggtgttgcggcgcaagcactcc
gagatcaaacgccagctgctggatcagacggtggtctccggcatcggcaacatctacgcc
gacgaggcgctgtggcgggcccggatcaacggcgcgcggttggccgagaagctcacccgg
ccgcagctgcgggccgcgctggacgccgccgccgaggtgatgcacgaggcgctggcccag
ggcgggacgtcgttcgacgcgctgtatgtcaatgtcaacggcgagtccggatacttcgac
cgctcgctggacgcctacggtcgcgagggcgagccgtgccggcgctgcggggcgccgatc
cggcgggagaagttcatgaaccgctcgtcgttctattgtccgcgctgtcaaccccgacca
cgcgccccgcgcacaaaataa
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