Melitaea cinxia (Glanville fritillary): 123659493
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Entry
123659493 CDS
T09237
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03013
Nucleocytoplasmic transport
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123659493
09122 Translation
03013 Nucleocytoplasmic transport
123659493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123659493
03041 Spliceosome [BR:
mcix03041
]
123659493
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123659493
Spliceosome [BR:
mcix03041
]
Complex C
Other components
EJC/TREX
123659493
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123659493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
123659493
NCBI-ProteinID:
XP_045450663
LinkDB
All DBs
Position
14:complement(3574214..3586554)
Genome browser
AA seq
666 aa
AA seq
DB search
MTDKLGFDELRVKYKDVLSKAFSTNNVELLESFSKNTNETDRKAAMDQAYRDKLLELLVE
EPNTLEKYVSFCIESCRRQMVTPTMPVVLLGDIFDALTLNKCEKMFTYVENGVNIWREEL
FFVACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENLT
EFGGDSSSTLKDSLDEEMVIDDDKNKLLIDYNLYCRFWSLQDFFRNPNTCYNKIQWKTFV
AHSGSVLSAFSSYKLESVELQKSKLNRLKPVNSDMETQENKEQHYFAKFLTNQKLLELQL
SDSNFRRCVLIQFLILFQYLTSTVKFKMESQELKSDQLDWVKETTSLVYKLLAETPPNGK
RFAECVKSILKREEHWNNWKNDGCPEFQKPKPPVQTESTEESKRGKKRRRPVGEIIKEYE
SQDKVFMGNNDLTKLWNLCPDNLAACRTKERDFMPSLESYLAGWDGAGAGGWGWRALRLL
ARRSPHFFVHTNNPIGRLPDYLDDMVKRITREAAANAANNTNGDASSGTNEKPIKQEQNE
DEMAEEQIETDIIKEEDTADMEQVPDSTHGEDDDKVTRSKVTMITPTQLDALASKLTDWK
KLAAKLGYKPDEIQFFETENATDIARAKNMLQLWFDDDEDASVENLLYIMEGLEMTEACE
TLKNAK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaattagggtttgatgagctacgagtgaaatataaggatgtattatcaaag
gcattttcgactaataacgtcgagttactcgaatcattttcaaagaataccaatgaaact
gatcgtaaagccgctatggaccaagcatatagggataaacttttagaattacttgtagaa
gagccaaacactttggaaaaatatgtttctttttgcatagaatcatgtagacgacaaatg
gtaacgccaacaatgcccgtcgtccttctcggtgatatatttgatgccctaacactaaat
aaatgcgagaagatgtttacttacgttgaaaacggcgtaaatatatggcgagaagagcta
ttttttgtagcttgtaaaaataatttactaagaatgtgtaatgatttgttgagaagactg
tccaggtcacagaatactgtgttttgtggacggatattgttattcttggcgaagttcttc
ccgttttccgaacgttctggattaaatatagtctcggaattcaatctagaaaatctaaca
gagtttggtggtgatagttcgagcacattaaaagattctctcgatgaggaaatggtgatt
gatgatgacaagaacaaactcttgatagattacaacttgtactgtaggttttggagttta
caagacttctttcgtaatccaaacacttgctacaataaaattcagtggaaaacttttgtt
gctcactctgggagtgtcttatctgcattttcttcatacaagttagaaagtgtagaacta
cagaaatcaaagttaaacagactcaaacccgttaactcagacatggagactcaagagaac
aaagaacaacattactttgcaaaatttttaacaaatcagaagcttctggaactacaatta
tcagattctaattttcggcgatgcgtcttgatacagtttctcattctatttcaatattta
acatctacagtgaaattcaagatggaatctcaagaattaaaatctgatcagttagattgg
gttaaagaaactacatcactagtatacaagttgttagctgaaacaccaccaaatggaaaa
cgttttgctgaatgtgttaaaagtatattgaagagagaggaacactggaataattggaag
aatgatggttgtccagagtttcagaaaccaaagcctccagtccaaacagagagtacggag
gaatctaagagagggaagaaacgtcgccggcccgttggcgaaattatcaaagaatacgag
agtcaggacaaagtctttatgggaaacaatgatttaacaaagttgtggaatctctgccct
gacaatctagcagcctgcagaacaaaagaaagggactttatgccatcgttagagtcgtac
ctggcgggctgggacggcgcgggcgcgggcggctggggctggcgcgcgctgcgcctgctg
gcgcgccgctcgccgcacttcttcgtgcacaccaacaaccccatcggccgcctgcccgac
tacctcgacgacatggttaagagaataacacgtgaagcggccgcgaatgctgcgaacaac
acaaacggtgatgcttcaagcggaaccaatgagaaacctataaaacaggaacaaaatgaa
gacgaaatggcagaggaacagatcgaaacagatatcataaaggaggaagatacggctgat
atggaacaagtaccagactcaacacacggtgaagatgacgataaagtaacaagatcaaaa
gtaaccatgataacaccaacgcagttagacgctttagcctccaaactaacggactggaag
aaactagcagcaaaactaggatataaaccagatgaaatacaattctttgagacagaaaac
gcaacagatattgccagagctaaaaatatgctgcaattgtggttcgatgatgatgaagat
gcatctgtggaaaacttgctttacatcatggaaggcttagaaatgacggaggcctgcgaa
acacttaaaaatgctaaatga
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