Melitaea cinxia (Glanville fritillary): 123669439
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Entry
123669439 CDS
T09237
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix04382
Cornified envelope formation
mcix04512
ECM-receptor interaction
mcix04518
Integrin signaling
mcix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123669439
04518 Integrin signaling
123669439
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123669439
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123669439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcix04147
]
123669439
00536 Glycosaminoglycan binding proteins [BR:
mcix00536
]
123669439
Exosome [BR:
mcix04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123669439
Glycosaminoglycan binding proteins [BR:
mcix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123669439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123669439
NCBI-ProteinID:
XP_045459000
LinkDB
All DBs
Position
3:complement(9998291..10049111)
Genome browser
AA seq
1799 aa
AA seq
DB search
MSGPARARLLAIQLVPATLLLLYWIPSPTSAVVCNQTVCNCAGIKGDRGSIGSPGIQGPQ
GEYGDDGPEGRIGIQGEPGDSGQQGDYGDKGERGIDGPYGPRGYTGPQGPNGLEGIRGYA
GLDGCSGIDGVIGLPGPQGFIGDRGIPGPYGEKGLQGLAGEGGVNSRGAKGDQGDFGRHG
TPGPVGPVGWRGDSGPRGEEGDQGAMGFRGEPGYRGDPGDDVVGPPGEKGDQGEIGEPGR
PALTIFIDQVQQNVTILAKGQKGEKGLRGQQGVKGIKGELGSTGAPGPYGLNGPQGYKGD
QGVEGSRGKPGHRGREGPPGPKGDKGWPGYDGPNGEDGLTGFPGEDGRPGIPGEQGPMGE
PGIYDERLNEPLLPGSMGPQGPIGYVGPPGPRGADGKPGLPGIMGPPGPPGTKGIPGRPG
PPGTSTKGEPGNDGFKGLPGPRGPMGKPGLTGVLGPKGFKGATVVGPDGEEGMPGTDGQP
GIRGDRGEVGYMGPPGFPGTGVTGVGPPGDDGSPGRPGVVGEPGEPGRPGIPGYKGERGD
DCPFCPSGQPGRKGQRGDDGFPGQKGYPGFEGLPGPPGRKGESGTPGVNGPPGPKGNKGQ
SGMAGPQGLKGKKGRLIQPPFSLTKAEPGPRGLPGFAGSPGFRGDPGWPGSPGPHGFKGI
KGVMGDEGFPGRPGRNGTKGSDGLPGWDGANADQSFAPFLFGQKGDKGIKGEIGEPGEDG
LKGDTGEALGFEINSKGEKGVMGPPGRRGFPGRKGELGDIGYGGFQGRRGDLGNPGISQP
GPIGPRGFPGEKGDIGPYGEPGTRGGQGPTGIPAEKGKKGSRGDIGFAVIYGERGIDGTK
GEMGDIGEAGYPGSPGRAGVMGPKGETGLPGDTGPQGPVGPQGRKGIQGIIVQGARGSPG
QPGRPGFMGIIGEPGLQGMHGLHGDVGQKGMKGETGLPGARGWTGDRGLPGVIGFPGFLG
RPGRSGLSGDRGEPGPAGYPGLPGNQGLPGLPGIKGFRGDTGIPGLSGLDGLPGIKGETG
DDGYMGLQGRRGENATKGMRGDFGDQGLPGFEGRPGFYGLKGEKGDRGNRGFDIPGRVGI
KGLPGNPGLSGRFGLPGVKGQVGDYGENGIKGLIGDKGYPGFPGQPGRPGYIGPKGLAGI
VGFAGRRGQKGDYGDNGEPGRMGMPGVPGNIGPPGLEGIRGDMGPKGEQGETGPSSYLPA
TKGDMGDIGIEGLEGLPGDVGEVGFTGAEGIKGDQGDIGFQGEFGDDGLPGQKGQIGDVG
PPGLPGFDGIGAEQGESGKDGLDGLPGWPGPMGQKGAPGEYGINGPEGSPGQPGLTFQGP
KGMKGMDGFPGRRGNMGIPGARGMEGEPGFIGPKGEVGEPGISISRKGETGDHGMPGFYG
LKGVRGDVGELGFNGYRGYIGEVGMKGFRGDDGEEGLQGYLGLKGIKGERGDTILPQDVR
PGERGDVGLPGKDGKNGRPGAPGPFGENGVPGFKGEQGDVGDIGPIGYPGPQGEQGLTGI
KGVIGIDGALGLPGRPGLPAPPPPIPKSRGFYFAVHSQTRMIPRCPTGTTPMWDGFSLIH
IVANAKAHGQDLGAPGSCLRRFSTMPFMFCNINNVCDFAQREDYSFWLSTPEPMPMAMTP
IQARDVGSYISRCQVCESSTRTIAIHSQSNAVPTCPSGWEELWIGYSFLMHTAGADAAGQ
SLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTIDDNRMFLKPEQQTLKADQVS
KVSRCAVCMRSQPKPTRNVAYTGSAGAVEAVPNEARRRPSDRPRHRVGGQRNNRGRRRY
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccggcgcgtgcgcgcctcttggcgatccagctcgtgcccgccacccttcta
cttctctactggattccttcaccaacttccgctgttgtatgcaatcaaacagtatgcaat
tgtgctggtattaaaggagaccgtggcagtataggtagtccagggatacaaggccctcaa
ggtgaatatggtgacgatggacctgaaggtcgtattggtatacaaggagaacctggcgac
tcgggacagcaaggtgactacggtgataaaggagaaaggggtatcgatggaccgtatgga
cctcgaggatataccggacctcagggacctaatggtttagaaggaatacgaggttatgca
gggttagacggatgtagtgggatagatggtgtaataggattaccaggaccgcaaggcttt
attggagatagaggaattccaggtccttacggagaaaaagggctacaaggcttagctgga
gaaggtggagtaaactcaagaggtgctaaaggagatcaaggtgactttggtcgtcatgga
acccctggtccagtagggccagttggttggagaggagatagtggcccccggggagaagaa
ggagatcagggagctatgggttttcgaggagaaccaggatatagaggagatcctggagat
gacgtagtaggtccacctggagaaaaaggagatcaaggtgaaatcggcgaaccaggaaga
ccggcgctaactatttttattgaccaagtgcaacaaaatgttactatcctagcaaagggt
caaaaaggtgaaaaaggacttaggggacagcaaggcgtcaagggtattaaaggagaacta
ggttcaacaggtgctccgggtccatatggtctgaacggacctcaaggctacaaaggtgat
caaggtgttgaaggatcaaggggaaagcctggtcatcgtggtcgagaagggcctcctgga
ccaaaaggagataaagggtggcctggttatgatggtcctaatggagaagatggccttacc
ggtttccctggagaagacggaagacctggaattccaggtgaacaagggcctatgggagag
ccaggaatatacgatgaaagactaaacgaaccactcttacctggatcaatgggtcctcaa
ggacctattggatacgttggccctccaggacctaggggagctgatgggaaacctggatta
cctggtattatgggtccgcccggcccaccaggaacaaagggtattcctggaagaccagga
ccaccgggaacctctactaaaggagaacctggaaatgatggttttaaaggtttacctgga
cctcgtggcccaatgggtaaacctggtcttactggcgttttgggtcctaagggatttaaa
ggagcaactgtagtaggtccagatggagaagaaggtatgccaggtactgatggacagcca
ggtataagaggggatagaggtgaagtaggatacatgggtccacctggttttcccggcact
ggtgtaactggagttggtccaccaggagacgatggatcaccaggccgcccaggtgtagtt
ggtgaacctggagaacctggaagaccaggcatacctggatataaaggagaacgcggtgac
gactgtcctttttgcccgtcaggccaacctgggcgtaagggacaaagaggcgacgacggt
tttcctggacaaaaaggttaccctgggtttgaaggtttacctgggcctcctggacgtaaa
ggtgaatcaggtacacctggcgttaatggaccacccggaccaaagggtaataaaggtcag
tcgggaatggctggtcctcaaggattgaaaggaaaaaaaggccgacttatacaaccacct
ttttcgttaactaaggccgaaccaggaccacgtggtttaccaggttttgctggaagtcct
ggttttcgtggagacccaggttggcctggaagtcctggacctcatggttttaagggaata
aagggagtaatgggcgatgagggtttccctggtcgacctggtcggaatggaacaaaaggc
agtgacggattacccgggtgggatggtgctaatgctgatcagtcatttgcaccttttctt
tttggacaaaagggagacaaaggcataaaaggtgaaattggtgaacccggagaagacggt
ttaaaaggtgacactggagaagcacttggttttgaaattaattcaaaaggcgagaaagga
gttatgggtcctcctggaagacgaggctttcctggaagaaagggggaacttggagatatc
ggttacggtggatttcagggtcgtcgcggtgatttaggaaacccgggtatttcacaacca
ggacctattggacctaggggctttccaggagaaaaaggagacattggtccctatggcgaa
cctggaacaagaggaggacaaggtccaaccggaatacccgctgaaaaaggaaagaaagga
tcacgaggagacattggattcgccgttatttacggtgaaagaggaatcgatggaactaaa
ggagaaatgggagatataggtgaggctggatatccaggatcacctggtagggctggagtg
atgggacctaaaggagaaactggacttcctggtgatacaggaccacaaggcccggtagga
cctcaaggacggaaaggtatacaaggaatcatagtacaaggagcccgtggttctccaggt
cagccgggaagaccaggttttatgggtataataggtgaaccaggattacaaggaatgcac
ggcttacatggtgatgttggacaaaaaggaatgaaaggagaaactggactacctggagct
agagggtggactggagatcgaggcctacctggggttataggtttcccaggatttttagga
cgacctggacgtagtggactatctggagaccgcggtgagcctgggcctgcaggttaccca
ggtttgccagggaaccaagggcttcctggtttacctggaattaaaggattccgtggtgat
acaggcatcccaggtttaagtggtttagatgggttgccaggtatcaaaggagaaactgga
gatgacggctatatgggacttcagggaaggcggggagaaaacgcaaccaagggtatgaga
ggagactttggtgaccaaggtttacctggatttgaaggaagacctggattttacgggctt
aaaggtgaaaaaggtgatagaggaaatcgtggatttgatataccaggacgtgttggtatt
aagggtttacctggcaatccaggattaagtggcagatttggtttacccggagtgaaagga
caagtcggagattatggagagaatggcataaaaggccttattggggataaaggttatcca
ggatttcctggtcaacctggaagaccaggatacattggacctaaaggattagcaggaatt
gtaggttttgctggaagacgtggacagaaaggtgactatggtgataatggtgaacctggt
aggatgggaatgcctggtgttcctggtaacattggtccacctggactagagggcatccgt
ggtgacatgggtccaaagggtgaacagggtgagacaggtcccagtagttatttaccagcc
actaaaggtgacatgggtgatataggaatagaaggactagaaggtttacccggagatgtg
ggagaagtaggttttactggagctgaaggtattaaaggagatcaaggtgacataggattt
caaggagaatttggtgacgatggacttcctgggcagaaaggacagataggagatgtaggt
cctcctggccttcctggctttgatggaataggtgcagaacaaggagaaagtggtaaagat
ggtctagatggtcttcccggttggcctggtcctatgggacaaaaaggtgcaccaggtgaa
tatggaattaacggccctgaaggatctcctggtcaaccaggcttaactttccaagggcca
aagggaatgaaaggtatggacggttttccaggaagacgtggaaatatgggtatacctggt
gctcgtggtatggaaggagagcctggttttataggacctaaaggcgaagtcggcgagcct
ggtatatctattagtcgtaaaggagaaacaggtgatcacggtatgccaggattttatggt
ttgaagggtgtacgaggagacgttggtgaattaggattcaatggatacaggggatacata
ggtgaagtaggcatgaaaggctttagaggtgacgatggtgaagagggactacaaggttac
ctcggtctaaaaggtattaaaggtgaaagaggcgatactattcttccacaggacgttagg
cctggagaacgtggtgatgtaggtttaccgggtaaagatggtaaaaatggacgacctggt
gcaccaggaccatttggagaaaatggtgttcctggttttaaaggcgaacagggtgacgtt
ggtgatattgggcctattggttatcctggacctcaaggagaacaaggtcttacaggtata
aaaggagtgataggtatagatggagcgcttgggctaccaggccgtcctggattaccagct
cctccaccacctataccaaaatcaaggggtttctacttcgctgttcattcacaaacaaga
atgatacctagatgtcctactgggacaacacctatgtgggatggattctcattaatacac
atagttgccaacgctaaagcacatggacaagatttaggagctccgggcagttgcttgaga
agattctctacaatgcctttcatgttctgtaatattaataacgtatgtgatttcgctcaa
agagaagactatagtttttggctttcgacgcccgaacccatgccgatggctatgactcca
attcaagccagagatgttggatcatatatatccagatgccaagtatgcgaatcatcaaca
agaaccatagcaatacatagccagagtaatgcagtaccgacatgtccgtccggctgggaa
gaattatggataggatatagttttctaatgcacacagcgggagcagatgcggcgggccag
agtcttatatcaccaggctcgtgtcttcgcgaatttagaacacgaccatttatcgaatgc
aacgggctaggtcgctgtaactatttcgctacggcagtgtcatactggctgtccactata
gacgacaacagaatgttcctaaaaccggagcaacagactttaaaagcagatcaagtgtct
aaagttagcagatgtgcagtatgtatgagaagtcaaccgaaaccgacaaggaatgtagcg
tatacaggaagcgccggtgctgtcgaagctgttcccaacgaggcgcgtcgtcgcccatcc
gatcggcctagacaccgcgtaggtggtcaacgcaacaaccggggtagacgtcgttattaa
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integrated database retrieval system
