KEGG   Mastomys coucha (southern multimammate mouse): 116078253
Entry
116078253         CDS       T07224                                 
Symbol
Irf1
Name
(RefSeq) interferon regulatory factor 1
  KO
K09444  interferon regulatory factor 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04625  C-type lectin receptor signaling pathway
mcoc04668  TNF signaling pathway
mcoc04917  Prolactin signaling pathway
mcoc05133  Pertussis
mcoc05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    116078253 (Irf1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    116078253 (Irf1)
  09152 Endocrine system
   04917 Prolactin signaling pathway
    116078253 (Irf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    116078253 (Irf1)
  09171 Infectious disease: bacterial
   05133 Pertussis
    116078253 (Irf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mcoc03000]
    116078253 (Irf1)
Transcription factors [BR:mcoc03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    116078253 (Irf1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 116078253
NCBI-ProteinID: XP_031209185
LinkDB
Position
Unknown
AA seq 328 aa
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSKNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDTKSKAKRKLCVGASPDTSDGLSSSTLPDDHSSYTTQGYLGQDLDLERDIT
PALSPCVISSSLSEWHMQMDIAPDSTTDLYNLQVSPMPSTSEAATDEDEEGKLPDDIMKL
FEQSEWQPTHVDGKGYLLNEPGAQFSSVCGDFSCKEEPEVDSPRGDIGIGIQHVFTEMKS
MDSILWMDNLLSNSMRPTSSIQAIPCAP
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcctatcactcggatgcgaatgagaccctggctagagatgcagattaattccaaccaa
attccagggctgatctggattaataaagaagagatgatcttccagatcccatggaagcat
gctgccaaacacggctgggacatcaacaaggatgcctgtctgttccggagctgggccatt
cacacaggccgatacaaagcaggggaaaaagagccagatcccaagacatggaaggcaaac
ttccgttgtgccatgaactccctaccggacattgaggaagtgaaggaccagagcaagaac
aagggcagctctgctgtacgggtgtaccggatgctgccacccctcacgaagaaccagagg
aaagagagaaagtccaagtccagccgagacactaagagcaaagccaagaggaagctgtgt
gtaggtgctagccctgacacctctgatggactcagcagctctactctacctgatgaccac
agcagctacaccactcagggctacctgggtcaggacttggacctagaaagggacattact
ccagcgctgtcaccgtgtgtcatcagcagtagtctctccgagtggcatatgcagatggac
atcgcaccagacagtaccactgatctgtataatctacaggtgtcacccatgccttccacc
tccgaagctgcaaccgacgaggatgaggaagggaagttacccgacgacatcatgaagctc
tttgaacagtctgagtggcagccgacacatgtggatggcaagggatacttgctcaatgaa
ccaggagcccagttctcttctgtctgtggagacttcagctgcaaagaggaaccagaagtt
gacagccctagaggggacattggtataggcatacaacatgtcttcacggagatgaagagt
atggactccatcttatggatggacaacctgctgagcaactctatgaggccgacgtcctcc
attcaggccattccttgtgcaccatag

DBGET integrated database retrieval system