Mastomys coucha (southern multimammate mouse): 116087028
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Entry
116087028 CDS
T07224
Name
(RefSeq) probable histidine--tRNA ligase, mitochondrial isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116087028
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcoc01007
]
116087028
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoc03016
]
116087028
Enzymes [BR:
mcoc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
116087028
Amino acid related enzymes [BR:
mcoc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
116087028
Transfer RNA biogenesis [BR:
mcoc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116087028
Prokaryotic type
116087028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
HHH_2
HHH_3
Motif
Other DBs
NCBI-GeneID:
116087028
NCBI-ProteinID:
XP_031221270
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MPHLGPLRCRAWAALLGQLLRPPRNVCIPAVGCHSQVATAVLTSEQLKRHQEKTNFIIKV
PKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYDLK
DQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIVQGRYREFCQCDFDI
AGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGMFAVCGVPESKLRTICSSM
DKLDKMSWEDVRQEMVAVKGLAPEVADRIGDYVQYHGGASLVEELFKDPRLSQSQLALQG
LADLKLLFEYLSLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVA
AGGRYDRLVAQFDPKGHNVPCVGLSIGVERIFYLVEQKMKISGEKVRTTETQVFVATPQK
NFLRERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCERTDIPLMVIIGEQEQSQGVIKL
RSVASREEVTINRESLVAEIQKRLSES
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgccccacctggggcccctgcgctgcagggcctgggctgcgctgctcggccagctcctg
cgacctccccgcaatgtgtgcatcccggcggtcggttgtcatagtcaggttgcaacagca
gtgttaacatcggaacaactaaaacgacatcaagaaaaaacaaattttatcatcaaggtt
ccaaagggcaccagggatttaagtcctcaacagatggtcgtgagggagaaaattcttgat
aagattatcagctgtttcaaacgtcatggggcaaaggggttggatacgccagcatttgag
ctaaaagaaatgctcaccgagaagtatgaagacaactttggcctcatgtatgatttgaag
gatcaaggtggagagttgttgtctctgcgctatgaccttactgtcccttttgctcgctac
ctggccatgaataaattgaagaagatgaaacgatatcaagttggaaaagtgtggcggcga
gagagcccagccatagtccagggccgctaccgggagttctgtcagtgtgattttgacatt
gctggtgagtttgacccaatgatccctgatgcagagtgtttgaggatcatgtgtgaaatc
ctaagtggattgcaactgggggactttctcattaaggtaaatgaccgtcgtgttgtagac
gggatgtttgctgtctgtggtgttcctgagagcaagctccgtaccatctgctcctccatg
gacaaactagataagatgtcttgggaagatgtgaggcaggagatggtggcagtgaaaggc
ctagctcctgaggtggccgatcgaattggggactacgtccaatatcatgggggggcatcc
ctggtagaggagctgttcaaggatcccagactgtcccaaagccagctggccttgcagggc
ctagcagacctgaagctgctctttgaatacctgagcttatttggaattgctgataagatc
tcccttgatctgagtctggcccggggcctggactattatacaggagtgatctatgaagca
gtactgctagagtctccagcccaggctggaaaggagactctgagcgtgggcagtgtggct
gctggtgggcgctatgacaggctggtagcccagtttgatcccaagggccataacgtgcct
tgtgtggggttgagcattggagtagagagaatcttctaccttgtggagcagaagatgaag
atttctggtgagaaggttcgaaccacagagacccaagtgtttgtggccacaccccagaag
aactttctccgagaacgtttgaagataattgcagagctttgggatgcagggatcaaggca
gagatgctttataaaaacaaccctaaactgttaactcagctgcactattgtgagagaaca
gacattcctctgatggtcattattggcgagcaagagcagagtcaaggtgtcatcaagctc
cgctcagtggccagcagagaggaagtgaccattaatcgagaaagtcttgtggctgaaatt
cagaagcgactgtctgagtcttga
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