Mastomys coucha (southern multimammate mouse): 116096733
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Entry
116096733 CDS
T07224
Symbol
Pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
116096733 (Pum1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
116096733
NCBI-ProteinID:
XP_031234696
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNTSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQSSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMF
PAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQ
QQAAAAAAATNSATQQSAPQAQQGQQQVLRGGASQRPLTPNQTQQGQQTDPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNTGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNS
QSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSD
LYKRTSSSLAPIGHSFYSSLSYSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLG
GLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLED
FRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVD
VFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEM
VRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI
LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS
QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE
PGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacagccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtgccaggatccataggagttgcaggccgctcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggcagtggtgga
ggcggctataacactagcaaacaccgatggcctacaggggataacattcatgcagagcac
caggtacgctctatggatgaattaaatcatgattttcaagcacttgctctggaagggaga
gctatgggcgagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcaaagtttccatgtg
aacagtgaggtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggagatgtgatggacaagaccaat
ggtttgccagtgcagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagagctctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctctgcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctattccaaagacccaatgcccttgctgttcagcagttgaca
gctgcccagcagcagcagtatgcacttgcagcagctcaccagcctcacatcggtatgttt
ccagcaggtttagctcccgctgcgtttgtccccaacccatacatcatcagcgctgctccc
ccagggacggacccctacacagctggattggctgcagcagcaacactcggcccagctgtg
gtccctcaccaatattatggagtcacgccatggggtgtctaccctgccagtcttttccag
caacaagctgctgcagctgcagcagcaacaaactctgctactcagcagagtgctccacag
gcccagcagggacagcagcaggttcttcgtggaggagctagccagcggcctttgacccca
aatcagacccagcagggacagcaaacagacccccttgtagcagctgccgcagtgaattct
gctcttgcctttggacaaggcctggctgcaggtatgccaggttacccagtcttggcacct
gctgcttactatgaccaaactggtgcccttgtggtgaatacaggggcaagaaatggcctg
ggagctccagtccggcttgttgctccagccccagtcatcattagctcctcagctgcacaa
gcagctgttgcagcggctgcagcttcagcaaatggagcagccggtggtcttgctggaact
acaaatggaccatttcgacctttaggcacccagcagccccaaccccagcctcagcagcag
cccagtaacaatctggcttccagctcattctatggcaacaactctctaagcagtaactcc
cagagcagctccctcttctctcagggttctgcccagcctgccaacacgtccttgggattc
ggaagcagcagttctcttggtgccaccctgggatcagcccttggagggtttggaacagca
gttgcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgac
ctttataagaggacatcgagcagcttggcccccattggacacagtttttatagcagcctt
agctattcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacat
tcacagacaccacctccttccctctcttcacatggatcctcttcaagcttaaacctggga
ggactcacaaacggcagtggaagatacatctctgctgctcccggtgccgaagccaagtac
cgcagtgcaagcagtgcctccagccttttcagccccagcagcacacttttttcttcctct
cgtttgagatatggaatgtctgatgttatgccctccggcaggagcagacttctggaagat
tttcgaaacaaccggtaccctaatttacaactgcgggagattgctgggcatataatggaa
ttttcccaagatcagcatggttctagattcattcaactgaaactagagcgtgccacagca
gctgagcgtcagcttgtcttcaacgaaatcctccaggctgcgtaccaacttatggtggat
gtgtttggaaattacgtcattcagaagttctttgaatttggcagccatgaacagaagctg
gctttggctgaacggattcgaggccacgtcctatcattggcattgcagatgtatggctgc
cgagtcatccagaaagctttggaatttattccctcagaccagcaggtaattaacgagatg
gtgcgggagctagatggccatgtcctgaagtgtgtaaaagaccagaacggcaaccatgtg
gttcagaagtgcattgaatgtgtacagccccagtctttgcagtttatcatcgatgcattc
aaggggcaggtgtttgctttgtccacgcacccttacggctgtagggtgatccagaggatc
ctagagcactgcctccctgaccagaccctccccatcctggaggagcttcaccagcacacg
gagcagcttgtgcaggatcagtatggaaattatgtaatccaacatgtactggagcatggt
cgtcctgaggataaaagcaaaattgtagcagagatccgaggcaatgtacttgtattgagt
cagcacaagtttgcaagcaatgttgtggagaagtgtgtcactcatgcctcacgtacagag
cgtgctgtgctcattgatgaggtatgcaccatgaacgacggtccccacagtgccttatac
accatgatgaaggatcagtatgctaactatgtggtccagaagatgatcgatgtggctgag
ccgggtcagcggaagattgtcatgcacaagatccggccacacatcgcaactcttcgaaag
tacacctatggcaagcacatcctggccaagctggagaagtactacatgaagaatggtgtg
gacttggggcccatttgtggtccccctaatggtatcatctga
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integrated database retrieval system
