Mastomys coucha (southern multimammate mouse): 116099416
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Entry
116099416 CDS
T07224
Symbol
Slc6a11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04082
Neuroactive ligand signaling
mcoc04721
Synaptic vesicle cycle
mcoc04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116099416 (Slc6a11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116099416 (Slc6a11)
04721 Synaptic vesicle cycle
116099416 (Slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116099416 (Slc6a11)
Transporters [BR:
mcoc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116099416 (Slc6a11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116099416
NCBI-ProteinID:
XP_031238822
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MTAEQALPLGNGKAAEEARGSETLGGGGGGGAAGTREARDKAVHERGHWNNKVEFVLSVA
GEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRR
VCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEKCVEFQ
KLNFSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIW
KGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGT
QIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQG
VPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVD
MYPKVFRRGYRRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFEC
VCIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVY
TYPAWGYGIGWLMALSSMLCIPLWIFIKLWKTEGTLPEKLQKLTVPSADLKMRGKLGASP
RTVTVNDCEAKVKGDGTISAITEKETHF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagcaagcgctgcccctgggcaacgggaaggcggccgaagaggcgcggggg
tccgagacgctgggcggcggcggcggcgggggcgcggcggggacgcgcgaggcgcgcgac
aaggctgtccacgagcgcggccactggaacaacaaggtggagttcgtgttgagcgtagcg
ggagagatcatcgggctgggcaacgtgtggcgtttcccctacctgtgctacaagaacggc
ggaggggcattcctgattccatacgtggtgttttttatctgctgtggaatccctgtcttc
tttctggaaacggccctgggacagttcacaagcgagggcggcatcacgtgctggaggaga
gtctgccctttatttgaaggcattggttacgcaacccaggtgatcgaggcacacctcaat
gtctactacatcatcatcctggcgtgggccatcttctacctaagcaattgcttcaccacg
gagctcccctgggccacctgtgggcacgagtggaatacagagaaatgtgtggagttccag
aagctgaacttcagcaactacagtcatgtgtccctgcagaacgccacctccccggtcatg
gagttctgggaacgccgggtcttggctatatctgatggtattgagcacattgggaacctc
cgttgggagctggcattgtgtctcctggcagcctggaccatctgctacttctgcatctgg
aagggtactaagtcaactggaaaggtcgtgtatgtcaccgcaaccttcccctacatcatg
ctgctgatcctcctgatccgaggggtcacattgccaggcgcctctgaaggcatcaagttc
tatctgtaccctgacctctcccggctctctgatccacaggtgtgggtggatgctgggacg
cagatctttttctcctatgccatctgcctgggctgcctgactgctctggggagttacaac
aactataacaacaactgctacagggactgtattatgctctgctgtctaaacagtggtacc
agcttcgtggctgggtttgccatcttctcagtcctgggcttcatggcatacgagcagggt
gtacctattgctgaggtggcagaatcaggtcctggactggctttcatcgcctaccccaag
gctgtcactatgatgcctctctcaccactgtgggccaccttgttcttcatgatgctcatc
ttcctgggcctggacagtcagtttgtgtgtgtggagagccttgtgacagctgtggtagac
atgtaccccaaggtcttccggcggggctacaggcgagaactgctcatcctggccctttcc
atcatctcctatttcctaggcctggtgatgctgacggagggaggcatgtacattttccag
ctctttgactcatacgctgccagtggcatgtgcttgctcttcgtggccatctttgagtgt
gtctgtatcggctgggtgtatggaagcaaccggttctatgacaatatcgaggacatgatt
ggctatcggccactgtcactcatcaagtggtgctggaaagtcgtgacccctggaatctgt
gcgggcatcttcatcttctttctggtgaagtacaagccactcaagtacaacaatgtgtac
acatatcctgcatggggctatggcattggctggctcatggctctgtcctccatgctgtgt
atcccactctggatcttcatcaagctgtggaaaacagagggcacgctgcccgagaaatta
cagaagttgacagtccccagcgctgatctgaaaatgcggggcaagcttggggccagccca
cggacggtgaccgttaatgactgtgaggccaaggtcaagggcgacggcaccatctcagcc
atcacagagaaggagacacacttttga
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