Mastomys coucha (southern multimammate mouse): 116101306
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Entry
116101306 CDS
T07224
Symbol
Trim21
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
116101306 (Trim21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116101306 (Trim21)
04131 Membrane trafficking [BR:
mcoc04131
]
116101306 (Trim21)
04121 Ubiquitin system [BR:
mcoc04121
]
116101306 (Trim21)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116101306 (Trim21)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116101306 (Trim21)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
116101306 (Trim21)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116101306 (Trim21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-RING_6
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-UDP
Motif
Other DBs
NCBI-GeneID:
116101306
NCBI-ProteinID:
XP_031240763
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MSLEKMWKEVTCYKCLDPMVEPMSIECGHCFCKKCISEVGKNGSGSCPECHQHFLLRNLR
PIWKMTSIGEKLKQHGQNTKKGIKERHCTKHGEKLHLFCEEDGQGLCWVCNQSGKHRDHT
RVPIEEAAKVYQEKIHVALEKLRKEKELVEKFEMDFPRQRADWKRKVDTQKSRIHAEFVH
QNSLLAQEEQRQLQKLEKDEKEHLRLLGKKEAELAEKNQALQELISELERRSRSSELELL
QEVRIILERSESWNPDTLDVDSPELTSSCHVPGRKKMLRTCWVHITLDRNTANSWLIISK
DRRQVRMGDTRQNVPENDERFNNYPMVLGAQRFSSGKMYWEVDVTQKEAWDLGVCRNSVQ
RKGQFSFSPENGFWIIWLWRRDRYEAGTS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggaaaagatgtggaaggaggtcacctgttataaatgtctggatcccatggtg
gagcctatgagtatcgaatgtggccattgcttttgcaagaaatgcatttctgaggttggg
aaaaatgggagcggttcatgtcccgagtgccatcaacactttctgctcagaaacctcagg
cccatttggaaaatgaccagcataggtgaaaagcttaaacaacatggccagaataccaag
aaaggcatcaaggaaaggcactgcacgaagcacggagagaaacttcacctgttctgtgag
gaagatgggcagggtctttgctgggtgtgtaaccagtctgggaaacaccgggaccacacc
agggtccctattgaagaggctgctaaggtataccaggagaagatccatgtggctttagaa
aaactgagaaaagaaaaagagttggtcgagaagtttgaaatggatttcccaaggcaaaga
gcagactggaagaggaaggtcgacacacagaagtcgaggattcacgcagagtttgtacat
cagaatagcttgctggctcaggaggaacaaaggcagctgcagaagctggagaaggatgaa
aaggagcacctgagactcctggggaagaaggaggctgagctggcagagaagaaccaggcc
ctgcaggagctgatctcagagctggagaggaggagccgcagttcagagctggagctactg
caggaggtgaggatcatcctggaaaggagtgaatcctggaacccagacacattagatgtt
gactccccagaactgacgagctcatgccatgtgccagggcggaagaagatgctgaggacg
tgttgggttcatattactctggatcgcaacactgccaactcatggctcatcatctcaaag
gatcggagacaagtgaggatgggggacacccgtcaaaacgtgcctgaaaacgatgagagg
tttaataattaccccatggtgctaggtgcccaaagattctcctctgggaagatgtactgg
gaggtagatgtgacccaaaaggaggcctgggatctgggggtttgcagaaattctgtacag
aggaaagggcagttttcattcagtcctgagaatggcttctggatcatttggctatggcga
agagaccgctatgaggctggtaccagt
DBGET
integrated database retrieval system
