Mastomys coucha (southern multimammate mouse): 116103399
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Entry
116103399 CDS
T07224
Symbol
Ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116103399 (Ap5b1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116103399 (Ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
FANCI_HD2
Motif
Other DBs
NCBI-GeneID:
116103399
NCBI-ProteinID:
XP_031245182
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MGPLSREAWAQRLGAFRASPSAFQAGAEGEDLGRDLLSDLRSEKLSEQTKVSLLTLSLEY
SDKLWPDAPAAEAAATSLMDTLVLLPSRPSALRRLLLLAATTALVSGGALGPTSEASCRL
LPLLLGLASGRDMGRSFGTALEQRHLQATACECLGELERCKPGLLAGALGMLRSLLGQMG
PIQPVSLLLALVLHNTLVVQSRSGAGLQGLLVAEDFSTGSCPWDWTLAEEWDAHLKPQAP
SWPTAGEEEEHGFPILEPSPEDTRELKAAVAQLLDTSYLLTPVAQAQLLWLLGWALRGLR
GQPPVLFKPQLVRLLGTAQLTLLHSVLSLKAAFGEALFTAQDEALLLRRLTLVAQHPALP
SPTHLFYLHCILSFPENCPLGPEGEEAAPLLLGPQLCGGLMPNLLHDPMVFLARLHLLCL
LCDDDEEEEKGRLQGPQWFLQELLTGLQQRAALDGGPRALATLCFQASYLVTSCLTRQPT
VRTSLIHGLAQLYGARPSLAPHFVDLLDQVSPELREPLREVLLQEAVARPGKNEALCWHL
QMLAKVAEGAAQSATLSFLQAAAIHCTDWGLHQALLRVCRALLRTGGGVALADLLQELAR
QLENADGRDHARLYYVLLSHLSSSKLGMALGPSLAAPALASSLMAENQGFASALMVQEAS
APIQVSVGPQKAKGPLPVLHLQVQALDVPVYSLELRFRVEGQLYEPLEAVHIPCLRPGQP
AHPLYLPLRPRCPAPARLHIRALYSTPDGLTCHAHLPPLSVNFADLFLPFPRLPKGSELH
FFDELWNSCLPKGVESRVWCPLGPQGLEALVSQHLEPFIVVAQPPTTYLIAVRLPPDSML
LLRLEKAQVDGVPVALRTDDWAVLPLVGDYLRGLSAH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggggcccctgagtcgagaagcctgggcccagcgcttgggggctttccgagccagccca
tccgcctttcaggcaggtgccgaaggcgaggatttgggtcgcgacctgttgagtgaccta
aggagtgagaagctaagcgagcagaccaaggtttccttactgacactgagcttggagtac
tctgacaaactctggccagatgcacctgccgcggaggctgctgccacttccttgatggac
acgctggtcctcctgccctcaagaccttcagccctccggaggctcctattgttggcagcc
accacagccctggtgtcaggaggtgctctcggacccacttcggaagcttcctgccggctc
ctgcccttacttcttggcttagcttcaggccgagacatgggacggagctttggaaccgcc
ttggaacagcgccacctacaggccacagcctgtgaatgccttggagagcttgagcgctgt
aagcccgggctgctggccggagccttggggatgctgcggagcctcctagggcaaatgggt
cccatccagcctgtcagcctgcttctggctcttgttctgcacaacaccttggtggtacag
tccaggtctggggctggcctgcaaggcctgcttgtggctgaggacttctccactgggagt
tgtccctgggactggaccctggctgaagaatgggatgcccaccttaagccccaggcgccc
agctggcccacagctggggaggaggaggagcatggctttccaattctagagcccagccct
gaggacacccgagagctgaaggctgccgtggcccagcttctggacacttcatatctgctc
actcctgtggcacaggctcaacttctgtggctgttgggctgggcccttcggggtctccgg
ggacagccaccagtgcttttcaagccacagctagttcggctgctgggcacagcacagctg
acactgttacactcagttctctctcttaaggcagcttttggtgaggccctgttcactgct
caggatgaagctctgctgctccgcaggcttaccttggtagcccagcacccagccttacct
tcacccacacacctcttttacctgcattgcatcctgagcttccctgagaattgtccatta
ggtccagaaggggaagaggctgccccactgctgttgggaccccagctatgcgggggcctc
atgcccaatctccttcatgacccgatggtcttcctggcccgcctgcatttgctgtgtctg
ctttgtgatgacgatgaggaagaggagaaaggtcggcttcagggcccacagtggttcctg
caggagctgctgactggcctacagcaaagggcagccctggatggtgggccccgagccttg
gccactctctgtttccaggcctcataccttgttaccagctgcctgactagacagcccaca
gtacggacatctttgatccacggactggcccagctgtatggagctcggccttccctggcc
ccccactttgtggacctcttagatcaggtcagccccgagctgagagagcccctcagggag
gtgctgcttcaagaggcagtggccaggccaggcaagaacgaagcactttgctggcacctg
cagatgctggcaaaagtggcagagggggctgctcagagtgccaccctcagctttctacag
gctgcagccatacactgcactgactggggcctacaccaggccctactgcgggtgtgccgc
gctctgctgcggactggcgggggagttgccctggcagacttgctacaggaactggccagg
cagctagagaatgctgacggacgggaccatgcccgactatactatgtcctcttgtcccat
ctgtcaagttccaagttggggatggcgctgggcccctcactggctgcacctgccctggcc
tcctcattgatggctgagaaccagggctttgcgtcagcactgatggtgcaggaggcctca
gctccaattcaagtgagtgtggggcctcagaaggccaaaggcccactcccggtgctgcat
ctgcaggtgcaggcgctggacgttcctgtctactctctggagctgcgcttccgtgtggaa
ggacagctctacgagccgttggaggctgtccacataccctgcttgcgtccgggacaacct
gcgcatcctctgtacctgcccctgcggccccgatgcccagcccctgcccgcctacacatc
cgggccctttacagcacacccgatggcctcacgtgccatgcccacctgccacccctgtct
gtgaactttgctgacctcttcctgcctttccccaggctccctaagggctcggagttgcat
ttcttcgatgagctctggaactcctgcctgccaaagggtgtagaaagtcgtgtgtggtgt
ccacttgggccacagggcctggaggccttggtgtcccaacacctagagccctttatagtg
gtggctcagccccctaccacctacctcatagccgtccgcctgccccctgactccatgctg
ctgctgcgcctggagaaagctcaggtggatggtgtgcctgtagccctaaggactgatgac
tgggctgtgctgcccctggtaggggactacctccgagggctgtcagcccactga
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