Mastomys coucha (southern multimammate mouse): 116104669
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Entry
116104669 CDS
T07224
Name
(RefSeq) tripartite motif-containing protein 30A-like
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03250
Viral life cycle - HIV-1
mcoc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116104669
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116104669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116104669
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116104669
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116104669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
Motif
Other DBs
NCBI-GeneID:
116104669
NCBI-ProteinID:
XP_031247022
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
LYVKTATKAFSLTKKKRQIGYISVFYERNLQLLQTYHLGVLGYPAISSGKHYWEVDVSRS
DAWLLGLNDGKCAQPQLHSKDEMGFKTKHYSNVKQNVMYQPKCGYWVIGLTNGSVYNAFD
ECSITHNSSVLALSLPSPPSRVGVFLDREACTLSFYDVSRYGALIYRFYDPAFPGKVYPY
FNPMNCSEPITVCGPPS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ctctacgtgaaaacagccacgaaagcattttcattaacaaaaaaaaaaagacaaatagga
tatataagcgtattctatgagaggaatcttcaacttcttcagacctaccatttgggtgtc
ctgggatatccagctatctcctcagggaagcattactgggaagtagacgtgtctagaagt
gatgcctggctcctcggattaaatgatggaaaatgtgctcaacctcaacttcattcaaag
gatgaaatgggcttcaaaacaaaacattattctaatgttaaacaaaatgtaatgtatcag
cctaaatgtggctactgggttatagggctgacgaatgggtctgtatacaatgcctttgat
gagtgttctatcacccacaattccagtgtcctggccctctctctgcctagtcctcccagt
cgtgttggagttttcctggaccgggaagcttgcactctctcattttatgatgtttctcgc
tatggagctctcatctataggttctatgaccctgccttccctggtaaagtctacccatat
tttaatcctatgaattgttcagagccaataacagtatgcggtccaccatcttaa
DBGET
integrated database retrieval system