Mycoavidus cysteinexigens: MCB1EB_0226
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Entry
MCB1EB_0226 CDS
T05801
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcys
Mycoavidus cysteinexigens
Pathway
mcys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCB1EB_0226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcys03021
]
MCB1EB_0226
03400 DNA repair and recombination proteins [BR:
mcys03400
]
MCB1EB_0226
Enzymes [BR:
mcys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCB1EB_0226
Transcription machinery [BR:
mcys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCB1EB_0226
DNA repair and recombination proteins [BR:
mcys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCB1EB_0226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
UbiD
Motif
Other DBs
NCBI-ProteinID:
BBE08387
UniProt:
A0A2Z6ESK6
LinkDB
All DBs
Position
273487..277593
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRLNVHQIPFLLATQLESFSDFLQADSAPGKRKPEGLQAAFMSV
FPIVSHNGFARLEFVNYSLSPPAFDVKECQQRGLTFCSALRAKVRLVLLDKESPSKPVIK
EVKEQEVYMGEMPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDSLYFRVDRRRKMPVTILLKAIGLNAEEILAHFFMFDQFKLMNE
GAQIKFVPERLRGEVARFDILDQNGKVIVQKDKRVNAKHIRDLESAKTETISVPEDYLLG
RVLAKAVVDAQTGEVLAEANEEITDTLLAKLREAEIKEIQTLYTNDLDQGPYISQTLRID
ETADQTAARIAIYRMMRPGEPPTEEAVEALFTRLFFSEDTYDLSKVGRMKFNRRVGGEEI
TGAMTLDNDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRTGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
DAGKVTNTIDYLSAIEEGRYVIAQANAAVSDDGTLTDELVSAREAGETLMVTPERVQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKALVGTGIERTVAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDDEAVSGDTGVDIYNLIKYTRSNQNTNINQRPIVKVG
DRIVRGDVLADGASTDIGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGSEEITCDISNLAETQLGRLDDSGIIYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMNGTVIDVQVFTREGIERDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLEKMLVGRVVNGGPKKLAKGAKITAEYLADLDHYHWFDLR
LADEDAAAQLEAIKESIAQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPVEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
KGLGHRIGDMLRAQTKVAELREFLHTIYNESGRREALEDLSDKEVLELASNLKEGVPFAT
SVFDGASEDEIARALELAWPDPIAQQLGMTKSKNQVTLYDGRTGDAFDRPVTVGYMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLTVK
SDDVTGRTKIYENLVKGEHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattctttcacggaaaaaaagcgcattcggaaaagttttgcgaagcgcttaaat
gttcaccaaatcccattcttattagcgactcaacttgagtcctttagcgattttttgcaa
gcggatagcgcacctgggaagcgcaaacctgaggggttgcaagcggcatttatgtcggtt
tttccaatcgtctcgcataatggtttcgcgcgtcttgaattcgtcaactatagtttgtcg
ccacctgcttttgatgttaaagagtgccaacaacgtggcttgactttctgctcggcattg
cgcgctaaagtgcgtttggtgttacttgacaaagagtcgccaagtaagccggtcatcaaa
gaggtgaaagagcaggaagtgtacatgggcgaaatgccgctgatgacaccgaccggctct
tttgtcatcaatggcacagaacgggttattgtgtcccagctgcatcgctcgcccggggtt
ttcttcgagcacgataaaggcaaaacacatagctccggtaaattacttttttctgcacgg
attatcccgtatcgcggttcatggctagattttgagtttgatccaaaagattctttatat
ttccgtgtagaccgtcgtcgcaaaatgccggtgacgattcttctcaaagcgattggttta
aatgccgaggaaatcctcgcgcatttctttatgtttgaccaattcaaattgatgaacgaa
ggcgcacagattaaatttgtccctgaacggttgcgcggggaagtcgcgcgctttgacatt
cttgatcaaaatggcaaagtcattgtgcaaaaagataaacgggttaatgcaaaacatatc
cgtgatcttgagagcgcaaagactgaaacaatctccgtgccggaagattatttgctgggc
cgggtacttgccaaagcggttgtagatgcgcaaaccggcgaagtattggcggaagctaac
gaagaaatcactgatacgctgctagcgaaattgcgtgaagccgaaatcaaagaaattcaa
acgctatacacgaatgatttagatcaaggtccgtatatttctcaaacgctgcgcattgac
gaaacggcagaccaaactgcggcgcgcatcgctatttaccgcatgatgcgtccgggcgaa
ccgcctaccgaagaagccgttgaagcgttatttacccggcttttcttcagcgaagatact
tatgatctatcgaaagtaggtcgtatgaagtttaatcgtcgtgtgggcggtgaagaaatc
accggtgccatgacactcgataacgacgatatcctcgccacgattaaaattcttgttgaa
ttgcggaatggtaaaggcgaagttgacgatattgatcaccttggcaatcgccgcgtacgt
tgtgttggcgaactggcggagaatcaattccgcacgggtttagtacgggttgagcgcgcg
gttaaagaaagattggggcaggccgaaagtgaaaatctgatgccgcatgatttgattaac
tcgaagcctatttcatcggccattcgcgagttttttggatcctcgcagctctcgcagttt
atggatcaaaccaatccgttgtctgaaatcacgcacaaacgccgtgtctccgcgctgggg
cctggcggtttgacgcgcgagcgagctgggtttgaagtgcgcgatgtgcatcctacgcac
tatggccgtgtctgcccgatcgaaacgccggaaggcccgaatattggtctgattaattcg
cttgcgctgtatgctcacctgaatgaatatggctttctagaaacgccttatcgtaaggtc
gatgcgggtaaagtaacgaacacaatcgactatctatcggcgattgaggaaggtcgttat
gtgatcgcgcaagcaaatgccgcggtgtcggacgatggcacgctgactgatgagttggtg
tctgcgcgtgaagcgggcgagaccttaatggtcaccccagagcgtgtgcaatatatggac
gttgcgccttctcagattgtctccgtggcggcttcgctgattccatttcttgaacacgat
gatgcgaatcgcgcgttaatgggatcgaatatgcaacggcaggctgtgccttgcttgcgc
cctgaaaaagccttggtgggcacggggattgagcgcacggtggcggtggattctggcacg
accgtgcaagcgtttcgcggtggggtggtagattacgtcgatgcgggccggattgtcatt
cgggtcaatgatgacgaagctgtctcaggcgataccggggtggatatttataacctcatt
aaatacacccgttcgaaccaaaacacgaatatcaatcagcgcccgattgtaaaagttgga
gatcggattgtgcgcggggatgtgctggctgatggcgcttcaacggatattggtgagctt
gcgctagggcagaatatgctggttgcgtttatgccttggaatggttacaactttgaagat
tcgattttgatttctgagaaagtggttgcggatgatcgctatacctcaattcatattgaa
gagttgaatgtagtggcgcgtgacaccaaactaggttcagaagaaatcacatgcgacatt
tcgaacttagctgaaacccagttgggtcgattggacgactcggggattatttatatcggc
gctgaagttgaagcaggcgatgtattagtcggtaaagtcacgccaaagggtgaaactcag
ctcacgccagaagaaaaattgctgcgcgcgatttttggcgagaaagcctctgatgtgaaa
gatacgtcgctgcgcgtaccctcagggatgaacggtacggtgattgatgtacaagtgttc
acgcgagaaggcattgaacgcgacaagcgcgcgcaacaaattattgacgatgagcttaaa
cgctatcgccttgatttgaatgaccaactgcgcattgttgaaggggatgcgtttcagcgt
ttagaaaaaatgcttgtgggtcgggtcgtcaatggtggtcctaaaaagctcgccaaagga
gcgaaaatcacggccgaatatttagccgatctggaccactatcactggtttgatttgcgt
ttagcggatgaagacgcggcggcgcaacttgaggcgattaaagagtcaattgcgcaaaaa
cgccatcagtttgatctggcctttgaagaaaagcgcaaaaaactaacccagggtgatgaa
ttgccgccaggcgttctgaaaatggtcaaagtctaccttgcagttaagcgtcgcttgcag
ccgggtgacaaaatggcgggtcgtcacggtaacaaaggtgtggtttcaaaaattgtgccg
gttgaggatatgccgtatatggccgatggtacccccgccgatatcgtattgaatccatta
ggcgtgccatcgcgcatgaacgttgggcagattcttgaaacccatcttggctgggctgcg
aaagggttagggcatcgcatcggtgatatgttgcgtgcgcaaaccaaagtagccgagctg
cgcgagttcttgcataccatctacaatgaaagtggtcggcgcgaagcattagaggaccta
agcgataaagaggtgttagaactggcctctaatctgaaagaaggcgtgccgtttgctacc
tcggttttcgatggagctagtgaggacgaaatcgctcgggcgcttgaattggcttggccg
gacccgattgcgcagcaattgggcatgacgaaatcaaagaatcaagtcacgttatatgat
gggcgcacaggcgatgcgtttgatcgtccagtcaccgtaggctatatgcatatgttgaaa
ttgcaccatctggtcgatgacaagatgcatgctcgctcaactggtccttactcactcgtt
acgcaacagccgttgggcggtaaagcccagtttggtggtcagcgttttggtgagatggag
gtatgggcgctcgaggcctacggcgcagcctatgtgttgcaagaaatgttgacagtgaaa
tcagacgatgtaactggccgcaccaagatttatgaaaacctggttaagggcgaacatgtg
attgatgcaggtatgcctgaatcctttaacgtgctagtgaaagaaattcgctcgctcggg
attgacattgaccttgatcggaattaa
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integrated database retrieval system
