KEGG   Mycoavidus cysteinexigens: MCB1EB_0738
Entry
MCB1EB_0738       CDS       T05801                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
mcys  Mycoavidus cysteinexigens
Pathway
mcys02024  Quorum sensing
mcys03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcys00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MCB1EB_0738
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MCB1EB_0738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcys03019]
    MCB1EB_0738
   03036 Chromosome and associated proteins [BR:mcys03036]
    MCB1EB_0738
Messenger RNA biogenesis [BR:mcys03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MCB1EB_0738
Chromosome and associated proteins [BR:mcys03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    MCB1EB_0738
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Gag_p24_C
Other DBs
NCBI-ProteinID: BBE08899
UniProt: A0A2Z6ETY4
LinkDB
Position
869986..870222
AA seq 78 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNVESFDQYVVLLKNTVTQMVYKHAI
STVVPARPVNFAADDEAN
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagtaacaaagggcagttattacaagacccgtttctgaacgcattgcgtaaagagcac
gtgccagtatcgatttacttagtgaatggcattaaattacaaggcaatgttgagtctttt
gaccagtacgtggtattgctaaaaaatactgtaactcaaatggtatataagcacgcaatt
tctacagttgtgcctgcccgtccagtcaatttcgctgcagatgacgaagccaattag

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