Mycoavidus cysteinexigens: MCB1EB_0738
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Entry
MCB1EB_0738 CDS
T05801
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
mcys
Mycoavidus cysteinexigens
Pathway
mcys02024
Quorum sensing
mcys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCB1EB_0738
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MCB1EB_0738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcys03019
]
MCB1EB_0738
03036 Chromosome and associated proteins [BR:
mcys03036
]
MCB1EB_0738
Messenger RNA biogenesis [BR:
mcys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MCB1EB_0738
Chromosome and associated proteins [BR:
mcys03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
MCB1EB_0738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Gag_p24_C
Motif
Other DBs
NCBI-ProteinID:
BBE08899
UniProt:
A0A2Z6ETY4
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All DBs
Position
869986..870222
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AA seq
78 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNVESFDQYVVLLKNTVTQMVYKHAI
STVVPARPVNFAADDEAN
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaagggcagttattacaagacccgtttctgaacgcattgcgtaaagagcac
gtgccagtatcgatttacttagtgaatggcattaaattacaaggcaatgttgagtctttt
gaccagtacgtggtattgctaaaaaatactgtaactcaaatggtatataagcacgcaatt
tctacagttgtgcctgcccgtccagtcaatttcgctgcagatgacgaagccaattag
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