Mycobacterium canettii CIPT 140070017: BN45_10763
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Entry
BN45_10763 CDS
T02422
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase (beta chain) RpoB (transcriptase beta chain) (RNA polymerase beta subunit)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcz
Mycobacterium canettii CIPT 140070017
Pathway
mcz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN45_10763 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcz03021
]
BN45_10763 (rpoB)
03400 DNA repair and recombination proteins [BR:
mcz03400
]
BN45_10763 (rpoB)
Enzymes [BR:
mcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN45_10763 (rpoB)
Transcription machinery [BR:
mcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN45_10763 (rpoB)
DNA repair and recombination proteins [BR:
mcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN45_10763 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
CCK62769
LinkDB
All DBs
Position
796254..799772
Genome browser
AA seq
1172 aa
AA seq
DB search
MADSRQSKTAASPSPSRPQSFSNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLIG
SPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVDECKDKD
MTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVY
FDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSE
QIVERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRY
DLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVE
TDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
IKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHVVAQANS
PIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDDANRAL
MGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYITVMHDNGT
RRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCTDDGEMALGKNLLVAIMPW
EGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDE
RGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGK
VIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPF
LADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAKGVPDWAARLPDELLEA
QPNAIVSTPVFDGAQEAELQGLLSATLPNRDGDVLVDADGKAMLFDGRSGEPFPYPVTVG
YMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQ
ELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIE
LREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ttggcagattcccgccagagcaaaacagccgctagtcctagtccgagtcgcccgcaaagt
ttctcgaataactccgtacccggagcgccaaaccgggtctccttcgctaagctgcgcgaa
ccacttgaggttccgggactccttgacgtccagaccgattcgttcgagtggctgatcggt
tcgccgcgctggcgcgaatccgccgccgagcggggtgatgtcaacccggtgggtggcctg
gaagaggtgctctacgagctgtctccgatcgaggacttctccgggtcgatgtcgttgtcg
ttctctgaccctcgtttcgacgatgtcaaggcacccgtcgacgagtgcaaagacaaggac
atgacgtacgcggctccactgttcgtcaccgccgagttcatcaacaacaacaccggtgag
atcaagagtcagacggtgttcatgggcgacttcccgatgatgaccgagaagggcacgttc
atcatcaacgggaccgagcgtgtggtggtcagccagctggtgcggtcgcccggggtgtac
ttcgacgagaccattgacaagtccaccgacaagacgctgcacagcgtcaaggtgatcccg
agccgcggcgcgtggctcgagtttgacgtcgacaagcgcgacaccgtcggcgtgcgcatc
gaccgcaaacgccggcaaccggtcaccgtgctgctcaaggcgctgggctggaccagcgag
cagattgtcgagcggttcgggttctccgagatcatgcgatcgacgctggagaaggacaac
accgtcggcaccgacgaggcgctgttggacatctaccgcaagctgcgtccgggcgagccc
ccgaccaaagagtcagcgcagacgctgttggaaaacttgttcttcaaggagaagcgctac
gaccttgcccgggtaggtcgctacaaggtcaacaagaagctcggcctgcatgtcggcgag
cccatcacgtcgtcgacgctgaccgaagaagacgtcgtggccaccatcgaatatctggtc
cgcttgcacgagggtcagaccacgatgaccgttccgggcggcgtcgaggtgccggtggaa
accgacgacatcgaccacttcggcaaccgccgcctgcgtacggtcggcgagctgatccaa
aaccagatccgggtcggcatgtcgcggatggagcgggtggttcgggagcggatgaccacc
caggacgtggaggcgatcacaccgcagacgttgatcaacatccgcccggtggtcgccgcg
atcaaggagtttttcggcaccagccagctgagccaattcatggaccagaacaacccgctg
tcggggttgacccacaagcgccgactgtcggcgctggggcccggcggtctgtcacgtgag
cgtgccgggctggaggtccgcgatgtgcacccgtcgcactacggccggatgtgcccgatc
gagacccctgaggggcccaacatcggtctgatcggatcgctgtcggtgtacgcgcgggtc
aacccgttcgggttcatcgaaacgccgtaccgcaaggtggtcgacggcgtggttagcgac
gagatcgtgtacctgaccgccgacgaggaggaccgccacgtggtggcacaggccaactcg
ccgatcgatgccgacggtcgcttcgtcgagccgcgcgtgctggtccgccgcaaggcgggc
gaggtggagtacgtgccctcgtccgaggtggactacatggacgtctcgccccgccagatg
gtgtcggtggccaccgcgatgattcccttcctggagcacgacgacgccaaccgtgcactc
atgggggccaacatgcagcgccaggcggtgccgctggtccgtagcgaggccccgctggtg
ggcaccgggatggagctgcgcgcggcgatcgacgccggcgacgtcgtcgtcgccgaagaa
agcggcgtcatcgaggaggtgtcggccgactacatcactgtgatgcacgacaacggcacc
cggcgtacctaccggatgcgcaagtttgcccggtccaaccacggcacctgcgccaaccag
tgccccatcgtggacgcgggcgaccgagtcgaggccggtcaggtgatcgccgacggtccc
tgtactgacgacggcgagatggcgctgggcaagaacctgctggtggccatcatgccgtgg
gagggccacaactacgaggacgcgatcatcctgtccaaccgcctggtcgaagaggacgtg
ctcacctcgatccacatcgaggagcatgagatcgatgctcgcgacaccaagctgggtgcg
gaggagatcacccgcgacatcccgaacatctccgacgaggtgctcgccgacctggatgag
cggggcatcgtgcgcatcggtgccgaggttcgcgacggggacatcctggtcggcaaggtc
accccgaagggtgagaccgagctgacgccggaggagcggctgctgcgtgccatcttcggt
gagaaggcccgcgaggtgcgcgacacttcgctgaaggtgccgcacggcgaatccggcaag
gtgatcggcattcgggtgttttcccgcgaggacgaggacgagttgccggccggtgtcaac
gagctggtgcgtgtgtatgtggctcagaaacgcaagatctccgacggtgacaagctggcc
ggccggcacggcaacaagggcgtgatcggcaagatcctgccggttgaggacatgccgttc
cttgccgacggcaccccggtggacattattttgaacacccacggcgtgccgcgacggatg
aacatcggccagattttggagacccacctgggttggtgtgcccacagcggctggaaggtc
gacgccgccaagggggttccggactgggccgccaggctgcccgacgaactgctcgaggcg
cagccgaacgccattgtgtcgacgccggtgttcgacggcgcccaggaggccgagctgcag
ggcctgttgtcggccacgctgcccaaccgcgacggtgacgtgctggtcgacgccgacggc
aaggccatgctcttcgacgggcgcagcggcgagccgttcccgtacccggtcacggttggc
tacatgtacatcatgaagctgcaccacctggtggacgacaagatccacgcccgctccacc
gggccgtactcgatgatcacccagcagccgctgggcggtaaggcgcagttcggtggccag
cggttcggggagatggagtgctgggccatgcaggcctacggtgccgcctacaccctgcag
gagctgttgaccatcaagtccgatgacaccgtcggccgcgtcaaggtgtacgaggcgatc
gtcaagggtgagaacatcccggagccgggcatccccgagtcgttcaaggtgctgctcaaa
gaactgcagtcgctgtgcctcaacgtcgaggtgctatcgagtgacggtgcggcgatcgaa
ctgcgcgaaggtgaggacgaggacctggagcgggccgcggccaacctgggaatcaatctg
tcccgcaacgaatccgcaagtgtcgaggatcttgcgtaa
DBGET
integrated database retrieval system
