Microcella daejeonensis: OVN18_06370
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Entry
OVN18_06370 CDS
T09552
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mdb
Microcella daejeonensis
Pathway
mdb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mdb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OVN18_06370 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdb03021
]
OVN18_06370 (rpoB)
03400 DNA repair and recombination proteins [BR:
mdb03400
]
OVN18_06370 (rpoB)
Enzymes [BR:
mdb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OVN18_06370 (rpoB)
Transcription machinery [BR:
mdb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OVN18_06370 (rpoB)
DNA repair and recombination proteins [BR:
mdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OVN18_06370 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
FH2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WAB82620
UniProt:
A0A9E8MMX6
LinkDB
All DBs
Position
1310569..1314060
Genome browser
AA seq
1163 aa
AA seq
DB search
MAASRTAKNSQSPKSGRDASRLSFAKISDTLTVPDLLALQTESFDWLVGNDIWKARVTEA
EAAGRTDVPGRSGLEEIFEEISPIEDLGETMQLSFTNPYLEEQKYSIDECKERGKTYAAP
LYVEAEFMNHMTGEIKTQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERSID
KTSDKDIYTSRIIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGMTTEEIREAF
AGYDSIEQTLEKDTVLTKEEALKDIYRKLRPGEQVAAEAARALLDNFYFNSKRYDLAKVG
RYKINRKLGVDAPLSDSVLSVEDIVATIRYMVSLHEGRTTLPGQRDGKPVELRLDVDDID
HFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFF
GTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEG
PNIGLIGSLASFARINAFGFIETPYRRVVKGKVTEQIDYLTASEEDDFVVAQAGAPLSKD
GKFVEDRVLVRRKGGEVELVPNEQVNYMDVSPRQMVSVATSLIPFLEHDDANRALMGANM
QRQAVPLLRSESPLVGTGMEGYAAVDAGDVITNEKAGVVAEVSADVVTVQLDEGGTQQYF
LRKFDRSNQGTNYNHRVVVSAGDRVEAGEVIADGPATENGELALGKNLLVAFMSWEGHNF
EDAIILSQNLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLADLDERGIIR
IGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTVIGVK
EFSADNDDELGSGVNQRVVVYIAQKRKISEGDKLAGRHGNKGVISKILPVEDMPFLEDGT
PVDIVLNPLGVPGRMNFGQVLEIHLGWAASRGWKVDGAPEWANRLPEVAREAAPGTKVAT
PVFDGASEEEIAGLLDSTTPNRDGVRMIDSTGKARLFDGRSGEPFPDPISVGYMYILKLH
HLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSD
DILGRVKVYESIVKGENIQEPGIPESFKVLIKEMQSLCLNVEVLSADGTAVSLKDNDDEV
FRAAEELGINISSRFESSSIDEI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcttcgcgcaccgctaagaattcccagtcccccaagagcggccgcgatgcgtcg
cggctctcattcgccaagatcagcgacacgctgaccgtccccgacctgctggccctccag
acggagagcttcgactggctggtcggcaacgacatctggaaggcccgggtcaccgaggcc
gaggccgccggccgcaccgatgttcccggccgcagcggcctcgaggagatcttcgaggag
atctccccgatcgaggacctcggcgagacgatgcagctctcgttcacgaacccctacctc
gaagagcagaagtactcgatcgacgagtgcaaggagcgcggcaagacctacgccgccccc
ctctacgtcgaggccgagttcatgaaccacatgacgggcgagatcaagacccagaccgtg
ttcatgggcgacttcccgctcatgaccgagcgcggcaccttcatcatcaacggcaccgag
cgcgtcgtcgtgtcgcagctcgtgcgcagcccgggcgtctacttcgagcggtcgatcgac
aagaccagcgacaaggacatctacacctcgcgcatcatccccagccgcggcgcctggctc
gagttcgagatcgacaagcgcgaccaggtgggcgtgcgcatcgaccgcaagcgcaagcag
tcggtcaccgtcttcctcaaggccctcggcatgaccaccgaggagatccgcgaggccttc
gccggctacgactccatcgagcagacgctcgagaaggacaccgtgctgacgaaggaggag
gcgctcaaggacatctaccgcaagctccgtccgggagagcaggtcgccgccgaggccgcc
cgcgcgctcctcgacaacttctacttcaactccaagcgctacgacctggcgaaggtcggt
cgctacaagatcaaccgcaagctcggcgtcgacgctcccctgagcgactcggtgctcagc
gtcgaggacatcgtggcgaccatccgctacatggtctcgctgcacgagggccgcacgacc
ctgcccggccagcgcgacggcaagcccgtcgagctgcgcctcgacgtggacgacatcgac
cacttcggcaaccgtcgcatccgcgccgtgggcgagctcatccagaaccaggtgcgcacc
ggtctcagccgcatggagcgcgtggtgcgcgagcgcatgacgacgcaggacatcgaggcg
atcaccccgcagaccctgatcaacgtgcgccccgtcgtggccgcgatcaaggagttcttc
ggcacctcgcagctgtcgcagttcatggatcagaacaacccgctcgcgggcctgacccac
aagcgccgcctctcggccctcggcccgggcggtctgagccgcgagcgcgcgggcgtcgag
gtgcgcgacgtgcacccctcgcactacggccgcatgtgccccatcgagaccccggaaggc
ccgaacatcggcctcatcggctcgctcgcctcgttcgcgcgcatcaacgcgttcggcttc
atcgagacgccgtaccgccgcgtggtcaagggcaaggtcaccgagcagatcgactacctg
accgccagcgaggaggacgacttcgtcgtcgcccaggccggtgctccgctgtcgaaggac
ggcaagttcgtcgaggaccgcgtcctcgtccgccgcaagggcggcgaggtcgagctcgtc
ccgaacgagcaggtcaactacatggacgtctcgccgcgccagatggtgtcggtcgcgacc
tcgctcatccccttcctcgagcacgacgatgcgaaccgcgcgctcatgggcgccaacatg
cagcgtcaggccgttccgctgctccgctccgagtcgccgctcgtcggcaccggcatggag
ggctacgcggccgtcgacgcgggtgacgtcatcaccaacgagaaggcgggcgtcgtcgcc
gaggtctcggccgacgtcgtcaccgtccagctcgacgagggcggcacgcagcagtacttc
ctgcgcaagttcgaccgctcgaaccagggtacgaactacaaccaccgcgtcgtcgtcagc
gcgggcgaccgcgtcgaggccggcgaggtcatcgccgacggccccgcgacggagaacggc
gagctcgcgctcggcaagaacctcctcgtggcgttcatgtcgtgggagggtcacaacttc
gaggacgcgatcatcctcagccagaacctcgtgaaggacgacacgctctcgtcgatccac
atcgaggagtacgaggtggatgcccgcgacacgaagctcggcaaggaggagatcacccgt
gacctccccaacgtcagccccgacctgctggccgacctcgacgagcgcggcatcatccgc
atcggcgccgaggtccgccccggcgacatcctcgtcggcaaggtcacgcccaagggcgag
accgagctctcggccgaggagcgcctgctgcgcgcgatcttcaacgagaagtcgcgcgag
gttcgcgacacctcgctgaaggtgccccacggcgagcagggcaccgtcatcggcgtcaag
gagttcagcgccgacaacgacgacgagctcggctcgggcgtcaaccagcgcgtggtcgtc
tacatcgcccagaagcgcaagatcagcgagggcgacaagctcgccggccgccacggcaac
aagggcgtcatctcgaagatcctgcccgtcgaggacatgccgttcctcgaggacggcacg
ccggtcgacatcgtgctcaacccgctcggcgtccccggccgcatgaacttcggccaggtc
ctcgagatccacctcggctgggccgcgtcgcgcggctggaaggtcgacggagcgcccgag
tgggcgaaccgtctgcccgaggtcgcccgcgaggccgcgcccggcaccaaggtcgccacc
ccggtgttcgacggtgccagcgaggaggagatcgccggtctgctcgactcgacgaccccc
aaccgcgacggcgtgcgcatgatcgactcgaccggtaaggcccgtctcttcgacggccgc
tcgggcgagccgttccccgacccgatctcggtgggctacatgtacatcctgaagctgcac
cacctcgtggacgacaagatccacgcgcgctcgacgggcccgtactcgatgatcacccag
cagccgctcggcggtaaggcccagttcggcggccagcgcttcggtgagatggaggtctgg
gcgctcgaggcgtacggcgcggcctacgcgctgcaggagctgctgacgatcaagtccgac
gacatcctcggccgcgtgaaggtgtacgagtcgatcgtcaagggcgagaacatccaggag
ccgggtatccccgagagcttcaaggtgctcatcaaggagatgcagtcgctctgcctgaac
gtcgaggtgctctcggccgacggcaccgcggtgagcctcaaggacaacgacgacgaggtc
ttccgcgcagcggaggagctcggcatcaacatctcctcccgcttcgagtcctcgtccatc
gacgagatctga
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integrated database retrieval system
